Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

IDDB

General information

URL: http://mdl.shsmu.edu.cn/IDDB
Full name: Infertility Disease DataBase
Description: Infertility Disease DataBase (IDDB) provides a versatile resource for genes, experiments and clinical records related with the infertility diseases, data in IDDB is annually updated and freely served for biologists and doctors interested in reproduction and infertility.
Year founded: 2021
Last update:
Version: Release 2020
Accessibility:
Accessible
Country/Region: China

Contact information

University/Institution: Shanghai Jiao Tong University
Address: No. 225 Chongqing Road, Shanghai, China
City: Shanghai
Province/State: Shanghai
Country/Region: China
Contact name (PI/Team): Jian Zhang
Contact email (PI/Helpdesk): jian.zhang@sjtu.edu.cn

Publications

32941628
IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility. [PMID: 32941628]
Wu J, Li D, Liu X, Li Q, He X, Wei J, Li X, Li M, Rehman AU, Xia Y, Wu C, Zhang J, Lu X.

Infertility is a complex multifactorial disease that affects up to 10% of couples across the world. However, many mechanisms of infertility remain unclear due to the lack of studies based on systematic knowledge, leading to ineffective treatment and/or transmission of genetic defects to offspring. Here, we developed an infertility disease database to provide a comprehensive resource featuring various factors involved in infertility. Features in the current IDDB version were manually curated as follows: (i) a total of 307 infertility-associated genes in human and 1348 genes associated with reproductive disorder in 9 model organisms; (ii) a total of 202 chromosomal abnormalities leading to human infertility, including aneuploidies and structural variants; and (iii) a total of 2078 pathogenic variants from infertility patients' samples across 60 different diseases causing infertility. Additionally, the characteristics of clinically diagnosed infertility patients (i.e. causative variants, laboratory indexes and clinical manifestations) were collected. To the best of our knowledge, the IDDB is the first infertility database serving as a systematic resource for biologists to decipher infertility mechanisms and for clinicians to achieve better diagnosis/treatment of patients from disease phenotype to genetic factors. The IDDB is freely available at http://mdl.shsmu.edu.cn/IDDB/.

Nucleic Acids Res. 2021:49(D1) | 28 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
1951/6895 (71.719%)
Genotype phenotype and variation:
286/1005 (71.642%)
Health and medicine:
490/1738 (71.864%)
Metadata:
187/719 (74.131%)
Literature:
182/577 (68.631%)
1951
Total Rank
27
Citations
6.75
z-index

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Record metadata

Created on: 2020-11-06
Curated by:
Haochen Liu [2024-07-19]
Lin Liu [2021-03-23]
Ming Chen [2020-11-21]
Ming Chen [2020-11-06]