Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

Project Score database

General information

URL: https://score.depmap.sanger.ac.uk
Full name:
Description: The Project Score database is a valuable new tool for investigating genetic dependencies in cancer cells and the identification of candidate oncology targets.
Year founded: 2021
Last update:
Version: 1.0
Accessibility:
Accessible
Country/Region: United Kingdom

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Wellcome Sanger Institute
Address:
City: Hinxton
Province/State: Cambridge
Country/Region: United Kingdom
Contact name (PI/Team): Mathew J. Garnett
Contact email (PI/Helpdesk): mg12@sanger.ac.uk

Publications

33068406
Project Score database: a resource for investigating cancer cell dependencies and prioritizing therapeutic targets. [PMID: 33068406]
Dwane L, Behan FM, Gonçalves E, Lightfoot H, Yang W, van der Meer D, Shepherd R, Pignatelli M, Iorio F, Garnett MJ.

CRISPR genetic screens in cancer cell models are a powerful tool to elucidate oncogenic mechanisms and to identify promising therapeutic targets. The Project Score database (https://score.depmap.sanger.ac.uk/) uses genome-wide CRISPR-Cas9 dropout screening data in hundreds of highly annotated cancer cell models to identify genes required for cell fitness and prioritize novel oncology targets. The Project Score database currently allows users to investigate the fitness effect of 18 009 genes tested across 323 cancer cell models. Through interactive interfaces, users can investigate data by selecting a specific gene, cancer cell model or tissue type, as well as browsing all gene fitness scores. Additionally, users can identify and rank candidate drug targets based on an established oncology target prioritization pipeline, incorporating genetic biomarkers and clinical datasets for each target, and including suitability for drug development based on pharmaceutical tractability. Data are freely available and downloadable. To enhance analyses, links to other key resources including Open Targets, COSMIC, the Cell Model Passports, UniProt and the Genomics of Drug Sensitivity in Cancer are provided. The Project Score database is a valuable new tool for investigating genetic dependencies in cancer cells and the identification of candidate oncology targets.

Nucleic Acids Res. 2021:49(D1) | 73 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
844/6895 (87.774%)
Health and medicine:
211/1738 (87.917%)
844
Total Rank
71
Citations
17.75
z-index

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Record metadata

Created on: 2020-11-09
Curated by:
Dong Zou [2020-12-08]
Xiaonan Liu [2020-11-26]
Xiaonan Liu [2020-11-25]
Chang Liu [2020-11-09]