Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CoVdb

General information

URL: http://covdb.popgenetics.net
Full name: Coronavirus Database
Description: A database resource and online analysis tools for coronaviruses on a historical and global scale
Year founded: 2008
Last update: 2020-10-03
Version: v3
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Chongqing University
Address: School of Life Sciences, Chongqing University, No. 55 Daxuecheng South Rd., Shapingba, Chongqing,401331, China
City: Chongqing
Province/State: Chongqing
Country/Region: China
Contact name (PI/Team): Zhenglin Zhu
Contact email (PI/Helpdesk): zhuzl@cqu.edu.cn

Publications

33009914
A database resource and online analysis tools for coronaviruses on a historical and global scale. [PMID: 33009914]
Zhenglin Zhu, Kaiwen Meng, Gexin Liu, Geng Meng

The recent outbreak of COVID-19 caused by a new zoonotic origin coronavirus (SARS-CoV-2 or 2019-nCoV) has sound the alarm for the potential spread of epidemic coronavirus crossing species. With the urgent needs to assist disease control and to provide invaluable scientific information, we developed the coronavirus database (CoVdb), an online genomic, proteomic and evolutionary analysis platform. CoVdb has brought together genomes of more than 5000 coronavirus strains, which were collected from 1941 to 2020, in more than 60 countries and in hosts belonging to more than 30 species, ranging from fish to human. CoVdb presents comprehensive genomic information, such as gene function, subcellular localization, topology and protein structure. To facilitate coronavirus research, CoVdb also provides flexible search approaches and online tools to view and analyze protein structure, to perform multiple alignments, to automatically build phylogenetic trees and to carry on evolutionary analyses. CoVdb can be accessed freely at http://covdb.popgenetics.net. Hopefully, it will accelerate the progress to develop medicines or vaccines to control the pandemic of COVID-19.

Database (Oxford). 2020:() | 19 Citations (from Europe PMC, 2026-03-28)

Ranking

All databases:
3121/6932 (54.991%)
Phylogeny and homology:
144/305 (53.115%)
Gene genome and annotation:
963/2039 (52.82%)
3121
Total Rank
18
Citations
3
z-index

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Not Rated
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Record metadata

Created on: 2020-11-10
Curated by:
Yuxin Qin [2023-09-26]
Yuxin Qin [2023-09-18]
Dong Zou [2021-03-10]
Ruru Chen [2020-11-28]
Chang Liu [2020-11-10]