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a catalog of worldwide biological databases

Database Profile

NetSlim

General information

URL: http://www.netpath.org/netslim
Full name: High-confidence Curated Signaling Maps
Description: High-confidence curated signaling maps;a resource for comprehensive manually curated signal transduction pathways
Year founded: 2011
Last update: 2011-09-29
Version: V1.0
Accessibility:
Accessible
Country/Region: United States

Classification & Tag

Data type:
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Contact information

University/Institution: Johns Hopkins University
Address: Baltimore 21205,MD,USA
City: Baltimore
Province/State: MD
Country/Region: United States
Contact name (PI/Team): Akhilesh Pandey
Contact email (PI/Helpdesk): pandey@jhmi.edu

Publications

21959865
NetSlim: high-confidence curated signaling maps. [PMID: 21959865]
Raju R, Nanjappa V, Balakrishnan L, Radhakrishnan A, Thomas JK, Sharma J, Tian M, Palapetta SM, Subbannayya T, Sekhar NR, Muthusamy B, Goel R, Subbannayya Y, Telikicherla D, Bhattacharjee M, Pinto SM, Syed N, Srikanth MS, Sathe GJ, Ahmad S, Chavan SN, Kumar GS, Marimuthu A, Prasad TS, Harsha HC, Rahiman BA, Ohara O, Bader GD, Sujatha Mohan S, Schiemann WP, Pandey A.

We previously developed NetPath as a resource for comprehensive manually curated signal transduction pathways. The pathways in NetPath contain a large number of molecules and reactions which can sometimes be difficult to visualize or interpret given their complexity. To overcome this potential limitation, we have developed a set of more stringent curation and inclusion criteria for pathway reactions to generate high-confidence signaling maps. NetSlim is a new resource that contains this 'core' subset of reactions for each pathway for easy visualization and manipulation. The pathways in NetSlim are freely available at http://www.netpath.org/netslim.

Database (Oxford). 2011:2011() | 33 Citations (from Europe PMC, 2026-04-04)

Ranking

All databases:
3816/6932 (44.965%)
Interaction:
709/1200 (41%)
Pathway:
238/454 (47.797%)
3816
Total Rank
31
Citations
2.067
z-index

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Record metadata

Created on: 2015-06-20
Curated by:
Lin Liu [2016-03-27]
Mengwei Li [2016-02-20]
Li Yang [2015-06-26]