Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

Pharnos

General information

URL: https://pharos.nih.gov/
Full name:
Description: The goal of KMC is to develop a comprehensive, integrated knowledge-base for the Druggable Genome (DG) to illuminate the uncharacterized and/or poorly annotated portion of the DG.
Year founded: 2021
Last update: 2022-04-30
Version: v3.12
Accessibility:
Accessible
Country/Region: United States

Classification & Tag

Data type:
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Major species:
Keywords:

Contact information

University/Institution: National Center for Advancing Translational Sciences
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Timothy K Sheils
Contact email (PI/Helpdesk): pharos@mail.nih.gov

Publications

33156327
TCRD and Pharos 2021: mining the human proteome for disease biology. [PMID: 33156327]
Sheils TK, Mathias SL, Kelleher KJ, Siramshetty VB, Nguyen DT, Bologa CG, Jensen LJ, Vidović D, Koleti A, Schürer SC, Waller A, Yang JJ, Holmes J, Bocci G, Southall N, Dharkar P, Mathé E, Simeonov A, Oprea TI.

In 2014, the National Institutes of Health (NIH) initiated the Illuminating the Druggable Genome (IDG) program to identify and improve our understanding of poorly characterized proteins that can potentially be modulated using small molecules or biologics. Two resources produced from these efforts are: The Target Central Resource Database (TCRD) (http://juniper.health.unm.edu/tcrd/) and Pharos (https://pharos.nih.gov/), a web interface to browse the TCRD. The ultimate goal of these resources is to highlight and facilitate research into currently understudied proteins, by aggregating a multitude of data sources, and ranking targets based on the amount of data available, and presenting data in machine learning ready format. Since the 2017 release, both TCRD and Pharos have produced two major releases, which have incorporated or expanded an additional 25 data sources. Recently incorporated data types include human and viral-human protein-protein interactions, protein-disease and protein-phenotype associations, and drug-induced gene signatures, among others. These aggregated data have enabled us to generate new visualizations and content sections in Pharos, in order to empower users to find new areas of study in the druggable genome.

Nucleic Acids Res. 2021:49(D1) | 112 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
596/6895 (91.371%)
Genotype phenotype and variation:
78/1005 (92.338%)
Interaction:
105/1194 (91.29%)
Health and medicine:
148/1738 (91.542%)
596
Total Rank
107
Citations
26.75
z-index

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Record metadata

Created on: 2021-10-19
Curated by:
Lin Liu [2022-06-02]
Yuxin Qin [2022-05-11]
Dong Zou [2021-10-19]