Database Commons

a catalog of biological databases

e.g., animal; RNA; Methylation; China

Database Profile

General information

URL: http://www.hmpdacc.org/
Full name: The Human Microbiome Project Data Coordination Center
Description: A Human Microbiome Project Multi-omic data resource
Year founded: 2021
Last update:
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Accessible
Real time : Checking...
Country/Region: United States
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Contact information

University/Institution: University of Maryland School of Medicine
Address: Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA
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Country/Region: United States
Contact name (PI/Team): Heather Huot Creasy
Contact email (PI/Helpdesk): hhuot@som.umaryland.edu

Publications

33305317
HMPDACC: a Human Microbiome Project Multi-omic data resource. [PMID: 33305317]
Creasy HH, Felix V, Aluvathingal J, Crabtree J, Ifeonu O, Matsumura J, McCracken C, Nickel L, Orvis J, Schor M, Giglio M, Mahurkar A, White O.

The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated hosts. The Human Microbiome Project Data Coordination Center (HMPDACC) was established to provide a portal to access data and resources produced by the HMP. The HMPDACC provides a unified data repository, multi-faceted search functionality, analysis pipelines and standardized protocols to facilitate community use of HMP data. Recent efforts have been put toward making HMP data more findable, accessible, interoperable and reusable. HMPDACC resources are freely available at www.hmpdacc.org.

Nucleic Acids Res. 2021:49(D1) | 1 Citations (from Europe PMC, 2021-11-27)

Ranking

All databases:
3930/5113 (23.157%)
Raw bio-data:
352/488 (28.074%)
Gene genome and annotation:
1105/1358 (18.704%)
Expression:
756/941 (19.766%)
Health and medicine:
850/1093 (22.324%)
3930
Total Rank
1
Citations
1
z-index

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Record metadata

Created on: 2021-11-15
Curated by:
lin liu [2021-11-15]