Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

Mouse GPCRs + Human and Rat Orthologs

General information

URL: https://esbl.nhlbi.nih.gov/Databases/GPCRs/
Full name:
Description: This is a comprehensive list of GPCRs in the genomes of mice, rats, and humans using multiple online data sources.
Year founded: 2021
Last update:
Version:
Accessibility:
Accessible
Country/Region: United States

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: National Heart, Lung, and Blood Institute
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Mark A. Knepper
Contact email (PI/Helpdesk): knepperm@nhlbi.nih.gov

Publications

34029142
Landscape of GPCR expression along the mouse nephron. [PMID: 34029142]
Brian G Poll, Lihe Chen, Chung-Lin Chou, Viswanathan Raghuram, Mark A Knepper

Kidney transport and other renal functions are regulated by multiple G protein-coupled receptors (GPCRs) expressed along the renal tubule. The rapid, recent appearance of comprehensive unbiased gene expression data in the various renal tubule segments, chiefly RNA sequencing and protein mass spectrometry data, has provided a means of identifying patterns of GPCR expression along the renal tubule. To allow for comprehensive mapping, we first curated a comprehensive list of GPCRs in the genomes of mice, rats, and humans (https://hpcwebapps.cit.nih.gov/ESBL/Database/GPCRs/) using multiple online data sources. We used this list to mine segment-specific and cell type-specific expression data from RNA-sequencing studies in microdissected mouse tubule segments to identify GPCRs that are selectively expressed in discrete tubule segments. Comparisons of these mapped mouse GPCRs with other omics datasets as well as functional data from isolated perfused tubule and micropuncture studies confirmed patterns of expression for well-known receptors and identified poorly studied GPCRs that are likely to play roles in the regulation of renal tubule function. Thus, we provide data resources for GPCR expression across the renal tubule, highlighting both well-known GPCRs and understudied receptors to provide guidance for future studies.

Am J Physiol Renal Physiol. 2021:321(1) | 19 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
2754/6895 (60.073%)
Expression:
563/1347 (58.278%)
2754
Total Rank
16
Citations
4
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Record metadata

Created on: 2022-04-16
Curated by:
Pei Liu [2022-08-23]
Lin Liu [2022-06-03]
Yuxin Qin [2022-05-12]
Yuxin Qin [2022-04-16]