Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CamRegBase

General information

URL: https://camregbase.org
Full name: Camelina Gene Regulation Database
Description: Here, we provide CamRegBase https://camregbase.org/ as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.
Year founded: 2020
Last update:
Version:
Accessibility:
Accessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Michigan State University
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Erich Grotewold
Contact email (PI/Helpdesk): grotewol@msu.edu

Publications

33306801
CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa. [PMID: 33306801]
Fabio Gomez-Cano, Lisa Carey, Kevin Lucas, Tatiana GarcĂ­a Navarrete, Eric Mukundi, Steve Lundback, Danny Schnell, Erich Grotewold

Camelina is an annual oilseed plant from the Brassicaceae family that is gaining momentum as a biofuel winter cover crop. However, a significant limitation in further enhancing its utility as a producer of oils that can be used as biofuels, jet fuels or bio-based products is the absence of a repository for all the gene expression and regulatory information that is being rapidly generated by the community. Here, we provide CamRegBase (https://camregbase.org/) as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.

Database (Oxford). 2020:2020() | 13 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
3748/6895 (45.656%)
Gene genome and annotation:
1155/2021 (42.9%)
3748
Total Rank
12
Citations
2.4
z-index

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Record metadata

Created on: 2022-04-21
Curated by:
Lina Ma [2022-06-29]
Jing Wei [2022-05-15]
Sicheng Luo [2022-04-21]