Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

QSDB

General information

URL: http://qsdb.org
Full name: Quorum Sensing Database
Description: QSDB is a comprehensive database of all published sensing and quenching relations between organisms and signalling molecules of the human microbiome, as well as an interactive web interface that allows browsing the database, provides graphical depictions of sensing mechanisms as Systems Biology Graphical Notation diagrams and links to other databases.
Year founded: 2021
Last update:
Version:
Accessibility:
Accessible
Country/Region: Germany

Funding support

  • 251654672 -TRR 161

Classification & Tag

Data type:
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Contact information

University/Institution: University of Konstanz
Address: Univ Konstanz, Dept Informat & Comp Sci, Univ Str 10, D-78464 Constance, Baden Wurttembe, Germany
City:
Province/State:
Country/Region: Germany
Contact name (PI/Team): Klein, Karsten
Contact email (PI/Helpdesk): karsten.klein@uni-konstanz.de

Publications

34559210
QSDB-a graphical Quorum Sensing Database. [PMID: 34559210]
Karsten Klein, Dimitar Garkov, Sina Rütschlin, Thomas Böttcher, Falk Schreiber

The human microbiome is largely shaped by the chemical interactions of its microbial members, which includes cross-talk via shared signals or quenching of the signalling of other species. Quorum sensing is a process that allows microbes to coordinate their behaviour in dependence of their population density and to adjust gene expression accordingly. We present the Quorum Sensing Database (QSDB), a comprehensive database of all published sensing and quenching relations between organisms and signalling molecules of the human microbiome, as well as an interactive web interface that allows browsing the database, provides graphical depictions of sensing mechanisms as Systems Biology Graphical Notation diagrams and links to other databases. Database URL: QSDB (Quorum Sensing DataBase) is freely available via an interactive web interface and as a downloadable csv file at http://qsdb.org.

Database (Oxford). 2021:2021() | 4 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
5232/6895 (24.133%)
Pathway:
329/451 (27.273%)
Literature:
448/577 (22.53%)
5232
Total Rank
4
Citations
1
z-index

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Record metadata

Created on: 2022-04-23
Curated by:
Lina Ma [2022-06-04]
Pei Liu [2022-05-15]
Sicheng Luo [2022-04-23]