Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

IMPC

General information

URL: https://www.mousephenotype.org
Full name: The International Mouse Phenotyping Consortium
Description: The International Mouse Phenotyping Consortium web portal makes available curated, integrated and analysed knockout mouse phenotyping data generated by the IMPC project consisting of 85M data points and over 95,000 statistically significant phenotype hits mapped to human diseases.
Year founded: 2022
Last update: 2023-07
Version: v1.0
Accessibility:
Accessible
Country/Region: United Kingdom

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: European Bioinformatics Institute
Address: European Bioinformatics Institute, European Molecular Biology Laboratory, Welcome Genome Campus, Hinxton CB10 1SD, UK.
City: Hinxton
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): Tudor Groza
Contact email (PI/Helpdesk): tudor@ebi.ac.uk

Publications

36305825
The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease. [PMID: 36305825]
Tudor Groza, Federico Lopez Gomez, Hamed Haseli Mashhadi, Violeta Muñoz-Fuentes, Osman Gunes, Robert Wilson, Pilar Cacheiro, Anthony Frost, Piia Keskivali-Bond, Bora Vardal, Aaron McCoy, Tsz Kwan Cheng, Luis Santos, Sara Wells, Damian Smedley, Ann-Marie Mallon, Helen Parkinson

The International Mouse Phenotyping Consortium (IMPC; https://www.mousephenotype.org/) web portal makes available curated, integrated and analysed knockout mouse phenotyping data generated by the IMPC project consisting of 85M data points and over 95,000 statistically significant phenotype hits mapped to human diseases. The IMPC portal delivers a substantial reference dataset that supports the enrichment of various domain-specific projects and databases, as well as the wider research and clinical community, where the IMPC genotype-phenotype knowledge contributes to the molecular diagnosis of patients affected by rare disorders. Data from 9,000 mouse lines and 750 000 images provides vital resources enabling the interpretation of the ignorome, and advancing our knowledge on mammalian gene function and the mechanisms underlying phenotypes associated with human diseases. The resource is widely integrated and the lines have been used in over 4,600 publications indicating the value of the data and the materials.

Nucleic Acids Res. 2023:51(D1) | 265 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
140/6895 (97.984%)
Raw bio-data:
15/582 (97.595%)
Metadata:
18/719 (97.636%)
Genotype phenotype and variation:
24/1005 (97.711%)
140
Total Rank
240
Citations
120
z-index

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Record metadata

Created on: 2023-08-23
Curated by:
Yuxin Qin [2023-09-12]
Xinyu Zhou [2023-09-11]
Yue Qi [2023-08-23]