Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

LMTdb

General information

URL: https://igkv.ac.in/xenom/index.html
Full name: A comprehensive transcriptome database for climate-resilient, nutritionally rich little millet
Description: The database was developed with the view of providing information about the most comprehensive part of the genome, the ‘Transcriptome’. The database includes transcriptome sequence information, functional annotation, microsatellite markers, DEGs, and pathway information.
Year founded: 2023
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: India

Contact information

University/Institution: Indira Gandhi Krishi Vishwavidyalaya
Address: Department of Plant Molecular Biology and Biotechnology, College of Agriculture, Indira Gandhi Krishi Vishwavidyalaya, Raipur, India
City:
Province/State:
Country/Region: India
Contact name (PI/Team): Girish Chandel
Contact email (PI/Helpdesk): ghchandel@gmail.com

Publications

36993866
LMT: A comprehensive transcriptome database for climate-resilient, nutritionally rich little millet (). [PMID: 36993866]
Shweta Shekhar, Archana S Prasad, Kalpana Banjare, Abhijeet Kaushik, Ajit K Mannade, Mahima Dubey, Arun Patil, Vinay Premi, Ashish K Vishwakarma, Abhinav Sao, Ravi R Saxena, Amit Dubey, Girish Chandel

Little millet () a native of Chhattisgarh, belongs to the minor millet group and is primarily known as a climate-resilient and nutritionally rich crop. However, due to the lack of enough Omic studies on the crop, the scientific community has largely remained unaware of the potential of this crop, resulting in less scope for its utilization in crop improvement programs. Looking at global warming, erratic climate change, nutritional security, and limited genetic information available, the Little Millet Transcriptome Database (LMT) (https://igkv.ac.in/xenom/index.aspx) was conceptualized upon completion of the transcriptome sequencing of little millet with the aim of deciphering the genetic signatures of this largely unknown crop. The database was developed with the view of providing information about the most comprehensive part of the genome, the 'Transcriptome'. The database includes transcriptome sequence information, functional annotation, microsatellite markers, DEGs, and pathway information. The database is a freely available resource that provides breeders and scientists a portal to search, browse, and query data to facilitate functional and applied Omic studies in millet crops.

Front Plant Sci. 2023:14() | 7 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
3319/6895 (51.878%)
Gene genome and annotation:
1022/2021 (49.48%)
Expression:
683/1347 (49.369%)
Pathway:
204/451 (54.989%)
3319
Total Rank
6
Citations
3
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Record metadata

Created on: 2023-08-28
Curated by:
Yue Qi [2023-09-12]
Yuanyuan Cheng [2023-09-06]
Yuanyuan Cheng [2023-09-05]
Xinyu Zhou [2023-08-28]