Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

RTRIP

General information

URL: http://ibi.zju.edu.cn/Rtrip/index.html
Full name: Rice Transposon Insertion Polymorphism
Description: RTRIP (Rice Transposon Insertion Polymorphism), which contains the information of 3000 rice varieties, 60 743 TE loci and genotyping of each variety, and provides versatile searching and browsing functions through intuitive web‐based interfaces.
Year founded: 2020
Last update:
Version:
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Zhejiang University
Address: Institute of Crop Science, Zhejiang Key Laboratory of Crop Germplasm, Zhejiang University, Hangzhou China
City: Hangzhou
Province/State: Zhejiang
Country/Region: China
Contact name (PI/Team): Jian‐Hong Xu
Contact email (PI/Helpdesk): jhxu@zju.edu.cn

Publications

32473053
RTRIP: a comprehensive profile of transposon insertion polymorphisms in rice. [PMID: 32473053]
Liu Z, Wang T, Wang L, Zhao H, Yue E, Yan Y, Irshad F, Zhou L, Duan MH, Xu JH.
Plant Biotechnol J. 2020:18(12) | 9 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
4325/6895 (37.288%)
Gene genome and annotation:
1332/2021 (34.142%)
4325
Total Rank
9
Citations
1.8
z-index

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Record metadata

Created on: 2023-09-20
Curated by:
Xinyu Zhou [2024-01-08]
Yuanyuan Cheng [2023-09-20]