Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CyclicPepedia

General information

URL: https://www.biosino.org/iMAC/cyclicpepedia
Full name: CyclicPepedia
Description: CyclicPepedia is a pioneering database that encompasses 8744 known cyclic peptides. This repository, structured as a composite knowledge network, offers a wealth of information encompassing various aspects of cyclic peptides, such as cyclic peptides’ sources, categorizations, structural characteristics, pharmacokinetic profiles, physicochemical properties, patented drug applications, and a collection of crucial publications.
Year founded: 2024
Last update: 2024-07-05
Version: v1.3.2
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
Data object:
NA
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: Tongji University
Address:
City:
Province/State:
Country/Region: China
Contact name (PI/Team): Dingfeng Wu
Contact email (PI/Helpdesk): dfw_bioinfo@126.com

Publications

38678388
CyclicPepedia: a knowledge base of natural and synthetic cyclic peptides. [PMID: 38678388]
Lei Liu, Liu Yang, Suqi Cao, Zhigang Gao, Bin Yang, Guoqing Zhang, Ruixin Zhu, Dingfeng Wu

Cyclic peptides offer a range of notable advantages, including potent antibacterial properties, high binding affinity and specificity to target molecules, and minimal toxicity, making them highly promising candidates for drug development. However, a comprehensive database that consolidates both synthetically derived and naturally occurring cyclic peptides is conspicuously absent. To address this void, we introduce CyclicPepedia (https://www.biosino.org/iMAC/cyclicpepedia/), a pioneering database that encompasses 8744 known cyclic peptides. This repository, structured as a composite knowledge network, offers a wealth of information encompassing various aspects of cyclic peptides, such as cyclic peptides' sources, categorizations, structural characteristics, pharmacokinetic profiles, physicochemical properties, patented drug applications, and a collection of crucial publications. Supported by a user-friendly knowledge retrieval system and calculation tools specifically designed for cyclic peptides, CyclicPepedia will be able to facilitate advancements in cyclic peptide drug development.

Brief Bioinform. 2024:25(3) | 14 Citations (from Europe PMC, 2026-01-10)

Ranking

All databases:
1731/6933 (75.047%)
Structure:
234/972 (76.029%)
Health and medicine:
421/1755 (76.068%)
1731
Total Rank
14
Citations
7
z-index

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Record metadata

Created on: 2024-07-15
Curated by:
Wenzhuo Cheng [2024-08-23]
Shiting Wang [2024-07-22]
Shiting Wang [2024-07-15]