| URL: | http://210.22.121.250 |
| Full name: | CoSFISH |
| Description: | CoSFISH is an online database that provides a comprehensive collection of cytochrome oxidase I (COI) and 18S rRNA sequences from 21,589 fish species, covering 8 classes and 90 orders. It offers various online tools for sequence comparison, alignment, analysis, and primer design. |
| Year founded: | 2024 |
| Last update: | 2024-05-27 |
| Version: | v1.0 |
| Accessibility: |
Accessible
|
| Country/Region: | China |
| Data type: | |
| Data object: | |
| Database category: | |
| Major species: |
NA
|
| Keywords: |
| University/Institution: | Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences |
| Address: | No.1 Xingyu Road, Xilang, Liwan District, Guangzhou 510380, China |
| City: | Guangzhou |
| Province/State: | Guangdong |
| Country/Region: | China |
| Contact name (PI/Team): | Xidong Mu |
| Contact email (PI/Helpdesk): | muxd@priri.ac.cn |
|
CoSFISH: a comprehensive reference database of COI and 18S rRNA barcodes for fish. [PMID: 38803273]
Fish, being a crucial component of aquatic ecosystems, holds significant importance from both economic and ecological perspectives. However, the identification of fish at the species level remains challenging, and there is a lack of a taxonomically complete and comprehensive reference sequence database for fish. Therefore, we developed CoSFISH, an online fish database. Currently, the database contains 21 535 cytochrome oxidase I sequences and 1074 18S rRNA sequences of 21 589 species, belonging to 8 classes and 90 orders. We additionally incorporate online analysis tools to aid users in comparing, aligning and analyzing sequences, as well as designing primers. Users can upload their own data for analysis, in addition to using the data stored in the database directly. CoSFISH offers an extensive fish database and incorporates online analysis tools, making it a valuable resource for the study of fish diversity, phylogenetics and biological evolution. Database URL: http://210.22.121.250:8888/CoSFISH/home/indexPage. |