Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

HIPdb

General information

URL: http://crdd.osdd.net/servers/hipdb
Full name: Database of HIV inhibiting peptides
Description: HIPdb is a manually curated database of experimentally verified HIV inhibiting peptides targeting various steps or proteins involved in the life cycle of HIV e.g. fusion, integration, reverse transcription etc.
Year founded: 2013
Last update: 2013-01-24
Version:
Accessibility:
Accessible
Country/Region: India

Classification & Tag

Data type:
Data object:
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Keywords:

Contact information

University/Institution: Institute of Microbial Technology
Address: Sector 39-A, Chandigarh-160036, India
City: Chandigarh
Province/State:
Country/Region: India
Contact name (PI/Team): Dr. Manoj Kumar
Contact email (PI/Helpdesk): manojk@imtech.res.in

Publications

23359817
HIPdb: a database of experimentally validated HIV inhibiting peptides. [PMID: 23359817]
Qureshi A, Thakur N, Kumar M.

Besides antiretroviral drugs, peptides have also demonstrated potential to inhibit the Human immunodeficiency virus (HIV). For example, T20 has been discovered to effectively block the HIV entry and was approved by the FDA as a novel anti-HIV peptide (AHP). We have collated all experimental information on AHPs at a single platform. HIPdb is a manually curated database of experimentally verified HIV inhibiting peptides targeting various steps or proteins involved in the life cycle of HIV e.g. fusion, integration, reverse transcription etc. This database provides experimental information of 981 peptides. These are of varying length obtained from natural as well as synthetic sources and tested on different cell lines. Important fields included are peptide sequence, length, source, target, cell line, inhibition/IC(50), assay and reference. The database provides user friendly browse, search, sort and filter options. It also contains useful services like BLAST and 'Map' for alignment with user provided sequences. In addition, predicted structure and physicochemical properties of the peptides are also included. HIPdb database is freely available at http://crdd.osdd.net/servers/hipdb. Comprehensive information of this database will be helpful in selecting/designing effective anti-HIV peptides. Thus it may prove a useful resource to researchers for peptide based therapeutics development.

PLoS One. 2013:8(1) | 81 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
2044/6895 (70.37%)
Health and medicine:
510/1738 (70.713%)
2044
Total Rank
75
Citations
6.25
z-index

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Record metadata

Created on: 2015-06-30
Curated by:
Dong Zou [2019-04-16]
[2018-11-30]
Lina Ma [2018-06-14]
Chunlei Yu [2016-03-31]
Mengwei Li [2016-02-20]
Chunlei Yu [2015-11-19]