Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

UDEDB

General information

URL: https://udedb.com
Full name: Uterine Dynamic Expression Database
Description: To depict the landscape of molecular changes in the endometrium undergoing cyclic dynamic changes, we developed the Uterine Dynamic Expression Database (UDEDB), a comprehensive resource that integrates published literature, single-cell sequencing data from the Human Endometrial Cell Atlas (HECA), and our experimental bulk RNA sequencing data from both humans and mice. Through literature mining of PubMed and EuropePMC, UDEDB provides detailed descriptions of the 2,020 reported molecules, including PubMed IDs, species, molecular types, experimental verification methods and references to high-throughput sequencing data. To further elucidate the mechanisms driving these expression changes, we conducted literature mining and systematically curated 4,349 transcriptional regulatory entries for both humans and mice across different uterine stages. Additionally, it offers gene expression values and dynamic expression trends across various phases of the human endometrial menstrual cycle, as well as different stages in pseudo-pregnant mouse epithelia.
Year founded: 2025
Last update: 2025-04-08
Version:
Accessibility:
Accessible
Country/Region: China

Funding support

  • The National Natural Science Foundation of China (82288102 to H.W., 82222026 to S.K.)
  • The National Key Research and Development Program of China (2022YFC2702500 to H.W.).

Contact information

University/Institution: Xiamen University
Address: Fujian Provincial Key Laboratory of Reproductive Health Research, Department of Obstetrics and Gynecology, The First Affiliated Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen, Fujian, 361102, China
City: Xiamen
Province/State: Fujian
Country/Region: China
Contact name (PI/Team): shuangbo_kong@163.com
Contact email (PI/Helpdesk): shuangbo_kong@163.com

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Record metadata

Created on: 2025-04-22
Curated by:
Dong Zou [2025-04-23]
Ni Yu [2025-04-22]