Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

PreDigs

General information

URL: https://www.biosino.org/predigs/
Full name: predicted signatures in digestive system
Description: PreDigs is a user-friendly database of predicted cell-type signatures for the human digestive system. It hosts 124 curated single-cell RNA-seq datasets, covering over 3.4 million cells, all freely downloadable. PreDigs standardizes cell type annotation across datasets, organizing 142 cell types into an 8-level hierarchical ontology. It provides three types of context-specific markers—Cell Markers, Subtype Markers, and TPN Markers—to support diverse research needs.
Year founded: 2025
Last update: 2025
Version: v1.0
Accessibility:
Accessible
Country/Region: China

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Contact information

University/Institution: Shanghai Institute of Nutrition and Health
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Country/Region: China
Contact name (PI/Team): Guoqing Zhang
Contact email (PI/Helpdesk): gqzhang@sinh.ac.cn

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Record metadata

Created on: 2025-05-22
Curated by:
Lina Ma [2025-06-01]
jiayue meng [2025-05-22]