e.g., HRA000087; HRA000150
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HRA000087
   HRA000087.xlsx
Title:
Single-cell transcriptomic analysis defines the interplay between tumor cells, viral infection, and the microenvironment in nasopharyngeal carcinoma
Release date:
2022-05-28
Description:
Data Accessibility:   
Controlled access Request Data
BioProject:
PRJCA001868
Study type:
Disease Study
Disease name:
nasopharynx carcinoma
Data Access Committee

For each controlled access study, there is a corresponding Data Access Committee(DAC) to determine the access permissions. Access to actual data files is not managed by NGDC.


DAC NO.:
HDAC000044
DAC name:
EBV-associated cancers
Contact person:
Bai Fan
Email:
fbai@pku.edu.cn
Description:
This project includes scRNA-seq, WGS and bulk RNA-seq data for NPC and Exon-seq, WGBS, EBV tageted-seq for EBV+GC
Individuals & samples
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
HRI025251INDIVIDUAL_HRA000087_25251maleHRS025251NPC36MWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025252INDIVIDUAL_HRA000087_25252maleHRS025252NPC36PWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025253INDIVIDUAL_HRA000087_25253maleHRS025253NPC16MWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025254INDIVIDUAL_HRA000087_25254maleHRS025254NPC16PWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025255INDIVIDUAL_HRA000087_25255maleHRS025255NPC17MWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025256INDIVIDUAL_HRA000087_25256maleHRS025256NPC17PWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025257INDIVIDUAL_HRA000087_25257maleHRS025257NPC36_10XWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025258INDIVIDUAL_HRA000087_25258maleHRS025258NPC33_10XWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025259INDIVIDUAL_HRA000087_25259maleHRS025259NPC46_10XWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
HRI025260INDIVIDUAL_HRA000087_25260maleHRS025260NPC47_10XWe applied Smart-seq2 and 10X Genomics chemistry to ~104000 single cells from 19 EBV+ NPC patients ...
Showing 1 to 10 of 61 rows rows per page
Files
Request Data
Run accession
Files
Experiment
Experiment title
Platform
Sample
Run accession
Files
Experiment
Experiment title
Platform
Sample
HRR026820HRR026820_f1.fq.gz (0.59 GB)HRX025677Smart-seq2:36M-1001Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026820HRR026820_r2.fq.gz (0.56 GB)HRX025677Smart-seq2:36M-1001Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026821HRR026821_f1.fq.gz (0.52 GB)HRX025678Smart-seq2:36M-1002Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026821HRR026821_r2.fq.gz (0.51 GB)HRX025678Smart-seq2:36M-1002Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026822HRR026822_f1.fq.gz (0.41 GB)HRX025679Smart-seq2:36M-1003Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026822HRR026822_r2.fq.gz (0.42 GB)HRX025679Smart-seq2:36M-1003Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026823HRR026823_f1.fq.gz (0.57 GB)HRX025680Smart-seq2:36M-1004Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026823HRR026823_r2.fq.gz (0.47 GB)HRX025680Smart-seq2:36M-1004Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026824HRR026824_f1.fq.gz (0.44 GB)HRX025681Smart-seq2:36M-1005Illumina HiSeq X TenHRS025251 (SAMC112911)
HRR026824HRR026824_r2.fq.gz (0.46 GB)HRX025681Smart-seq2:36M-1005Illumina HiSeq X TenHRS025251 (SAMC112911)
Showing 1 to 10 of 3106 rows rows per page
Submitter:   Bai Fan / fbai@pku.edu.cn
Organization:   Peking University
Submission date:   2019-10-28
Requests:   116