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CRA002118 基本信息
标题: Single cell RNA sequencing of multistep ESCC mouse model
项目编号: PRJCA001908 /
发布日期: 2019-12-25
文件个数: 118
文件大小: 1080.41 GB
出版信息
文章标题
Single-cell transcriptomic analysis in a mouse model deciphers cell transition states in the multistep development of esophageal cancer
杂志名称
Nature Communications
发表年份
2020
Doi
10.1038/s41467-020-17492-y
PubMed ID
32709844

文章标题
Temporal single-cell RNA sequencing dataset of gastroesophagus development from embryonic to post-natal stages
杂志名称
Scientific Data
发表年份
2024
Doi
10.1038/s41597-024-04081-7
PubMed ID
39550363

文章标题
Autophagy Contributes to Homeostasis in Esophageal Epithelium Where High Autophagic Vesicle Level Marks Basal Cells With Limited Proliferation and Enhanced Self-Renewal Potential
杂志名称
Cellular and Molecular Gastroenterology and Hepatology
发表年份
2024
Doi
10.1016/j.jcmgh.2024.02.018
PubMed ID
38452871

文章标题
Transcriptomics based multi-dimensional characterization and drug screen in esophageal squamous cell carcinoma
杂志名称
EBioMedicine
发表年份
2021
Doi
10.1016/j.ebiom.2021.103510
PubMed ID
34365093

文章标题
Decoding spatiotemporal transcriptional dynamics and epithelial fibroblast crosstalk during gastroesophageal junction development through single cell analysis
杂志名称
Nature Communications
发表年份
2024
Doi
10.1038/s41467-024-47173-z
PubMed ID
38594232

文章标题
A Systemic and Integrated Analysis of p63-Driven Regulatory Networks in Mouse Oral Squamous Cell Carcinoma
杂志名称
Cancers
发表年份
2023
Doi
10.3390/cancers15020446
PubMed ID
36672394

文章标题
Lymphatic endothelial cell-mediated accumulation of CD177 + Treg cells suppresses antitumor immunity in human esophageal squamous cell carcinoma
杂志名称
Oncoimmunology
发表年份
2024
Doi
10.1080/2162402X.2024.2327692
PubMed ID
38516269

数据下载
元数据信息:
CRA002118.xlsx
文件:
HTTPS：https://download.cncb.ac.cn/gsa/CRA002118
推荐 Qtrans（测试）： 文件下载 
Aspera命令行:  帮助  
FTP：ftp://download.big.ac.cn/gsa/CRA002118

 提示： HTTP下载速度有限，推荐使用FTP客户端（比如 FileZilla Client）下载数据。

Experiments和Runs信息
实验编号 实验名称 物种名称 测序平台 样本编号
CRX074540 NOR_M25_RNA_7 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087452 NOR_M25_RNA_7 File: CRR087452_f1.fq.gz
File: CRR087452_r2.fq.gz
CRX074539 NOR_M25_RNA_6 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087451 NOR_M25_RNA_6 File: CRR087451_f1.fq.gz
File: CRR087451_r2.fq.gz
CRX074538 NOR_M25_RNA_5 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087450 NOR_M25_RNA_5 File: CRR087450_f1.fq.gz
File: CRR087450_r2.fq.gz
CRX074537 NOR_M25_RNA_4 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087449 NOR_M25_RNA_4 File: CRR087449_f1.fq.gz
File: CRR087449_r2.fq.gz
CRX074536 NOR_M25_RNA_3 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087448 NOR_M25_RNA_3 File: CRR087448_f1.fq.gz
File: CRR087448_r2.fq.gz
CRX074535 NOR_M25_RNA_2 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087447 NOR_M25_RNA_2 File: CRR087447_f1.fq.gz
File: CRR087447_r2.fq.gz
CRX074534 NOR_M25_RNA_1 Mus musculus Illumina HiSeq X Ten SAMC116132
Run编号 Run别名 Run序列文件信息
CRR087446 NOR_M25_RNA_1 File: CRR087446_f1.fq.gz
File: CRR087446_r2.fq.gz
CRX074533 NOR_M8_RNA_5 Mus musculus Illumina HiSeq X Ten SAMC116131
Run编号 Run别名 Run序列文件信息
CRR087445 NOR_M8_RNA_5 File: CRR087445_f1.fq.gz
File: CRR087445_r2.fq.gz
CRX074532 NOR_M8_RNA_4 Mus musculus Illumina HiSeq X Ten SAMC116131
Run编号 Run别名 Run序列文件信息
CRR087444 NOR_M8_RNA_4 File: CRR087444_f1.fq.gz
File: CRR087444_r2.fq.gz
CRX074531 NOR_M8_RNA_3 Mus musculus Illumina HiSeq X Ten SAMC116131
Run编号 Run别名 Run序列文件信息
CRR087443 NOR_M8_RNA_3 File: CRR087443_f1.fq.gz
File: CRR087443_r2.fq.gz
CRX074530 NOR_M8_RNA_2 Mus musculus Illumina HiSeq X Ten SAMC116131
Run编号 Run别名 Run序列文件信息
CRR087442 NOR_M8_RNA_2 File: CRR087442_f1.fq.gz
File: CRR087442_r2.fq.gz
CRX074529 NOR_M8_RNA_1 Mus musculus Illumina HiSeq X Ten SAMC116131
Run编号 Run别名 Run序列文件信息
CRR087441 NOR_M8_RNA_1 File: CRR087441_f1.fq.gz
File: CRR087441_r2.fq.gz
CRX074528 NOR_M2_RNA_2_1 Mus musculus Illumina HiSeq X Ten SAMC116130
Run编号 Run别名 Run序列文件信息
CRR087440 NOR_M2_RNA_2_1 File: CRR087440_f1.fq.gz
File: CRR087440_r2.fq.gz
CRX074527 NOR_M2_RNA_1_2 Mus musculus Illumina HiSeq X Ten SAMC116130
Run编号 Run别名 Run序列文件信息
CRR087439 NOR_M2_RNA_1_2 File: CRR087439_f1.fq.gz
File: CRR087439_r2.fq.gz
CRX074526 NOR_M2_RNA_1_1 Mus musculus Illumina HiSeq X Ten SAMC116130
Run编号 Run别名 Run序列文件信息
CRR087438 NOR_M2_RNA_1_1 File: CRR087438_f1.fq.gz
File: CRR087438_r2.fq.gz
CRX074525 NOR_M1_RNA_5 Mus musculus Illumina HiSeq X Ten SAMC116129
Run编号 Run别名 Run序列文件信息
CRR087437 NOR_M1_RNA_5 File: CRR087437_f1.fq.gz
File: CRR087437_r2.fq.gz
CRX074524 NOR_M1_RNA_4 Mus musculus Illumina HiSeq X Ten SAMC116129
Run编号 Run别名 Run序列文件信息
CRR087436 NOR_M1_RNA_4 File: CRR087436_f1.fq.gz
File: CRR087436_r2.fq.gz
CRX074523 NOR_M1_RNA_3 Mus musculus Illumina HiSeq X Ten SAMC116129
Run编号 Run别名 Run序列文件信息
CRR087435 NOR_M1_RNA_3 File: CRR087435_f1.fq.gz
File: CRR087435_r2.fq.gz
CRX074522 NOR_M1_RNA_1 Mus musculus Illumina HiSeq X Ten SAMC116129
Run编号 Run别名 Run序列文件信息
CRR087434 NOR_M1_RNA_1 File: CRR087434_f1.fq.gz
File: CRR087434_r2.fq.gz
CRX074521 INF_RNA_1_2 Mus musculus Illumina HiSeq X Ten SAMC116133
Run编号 Run别名 Run序列文件信息
CRR087433 INF_RNA_1_2 File: CRR087433_f1.fq.gz
File: CRR087433_r2.fq.gz
提交者:Yamei Chen (linslab@163.com)
所属单位:Cancer Hospital, Chinese Academy of Medical Sciences
提交日期:2019-11-20