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CRA003317 Information
Title: Comprehensive profiling of circular RNAs with nanopore sequencing and CIRI-long
BioProject: PRJCA003631 /
Release date: 2021-01-30
Files: 40
File size: 95.86 GB
Publication
Article title
Comprehensive profiling of circular RNAs with nanopore sequencing and CIRI-long
Journal name
Nature Biotechnology
Year
2021
DOI
10.1038/s41587-021-00842-6
PubMed ID
33707777

Article title
Full-length circular RNA profiling by nanopore sequencing with CIRI-long
Journal name
Nature Protocols
Year
2023
DOI
10.1038/s41596-023-00815-w
PubMed ID
37045995

Dataset Downlaod
MetaData:
CRA003317.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa/CRA003317
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX166188 Illumina_RNaseR_rep2 Mus musculus Illumina HiSeq X Ten SAMC251360
Run accession Run alias Run data file information
CRR194215 Illumina_RNaseR_rep2 File: CRR194215_f1.fq.gz
File: CRR194215_r2.fq.gz
CRX166187 Illumina_RNaseR_rep1 Mus musculus Illumina HiSeq X Ten SAMC251359
Run accession Run alias Run data file information
CRR194214 Illumina_RNaseR_rep1 File: CRR194214_f1.fq.gz
File: CRR194214_r2.fq.gz
CRX166186 Illumina_total_rep2 Mus musculus Illumina HiSeq X Ten SAMC251360
Run accession Run alias Run data file information
CRR194213 Illumina_total_rep2 File: CRR194213_f1.fq.gz
File: CRR194213_r2.fq.gz
CRX166185 Illumina_total_rep1 Mus musculus Illumina HiSeq X Ten SAMC251359
Run accession Run alias Run data file information
CRR194212 Illumina_total_rep1 File: CRR194212_f1.fq.gz
File: CRR194212_r2.fq.gz
CRX166184 Long_SMARTer_H-_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194211 Long_SMARTer_H-_rep2 File: CRR194211.fq.gz
CRX166183 Long_SMARTer_H-_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194210 Long_SMARTer_H-_rep1 File: CRR194210.fq.gz
CRX166182 Long_SMARTer_H-_Atail_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194209 Long_SMARTer_H-_Atail_rep2 File: CRR194209.fq.gz
CRX166181 Long_SMARTer_H-_Atail_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194208 Long_SMARTer_H-_Atail_rep1 File: CRR194208.fq.gz
CRX166180 Long_Maxima_H-_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194207 Long_Maxima_H-_rep2 File: CRR194207.fq.gz
CRX166179 Long_Maxima_H-_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194206 Long_Maxima_H-_rep1 File: CRR194206.fq.gz
CRX166178 Long_Maxima_H-_Atail_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194205 Long_Maxima_H-_Atail_rep2 File: CRR194205.fq.gz
CRX166177 Long_Maxima_H-_Atail_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194204 Long_Maxima_H-_Atail_rep1 File: CRR194204.fq.gz
CRX166176 Middle_SMARTer_H-_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194203 Middle_SMARTer_H-_rep2 File: CRR194203.fq.gz
CRX166175 Middle_SMARTer_H-_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194202 Middle_SMARTer_H-_rep1 File: CRR194202.fq.gz
CRX166174 Middle_SMARTer_H-_Atail_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194201 Middle_SMARTer_H-_Atail_rep2 File: CRR194201.fq.gz
CRX166173 Middle_SMARTer_H-_Atail_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194200 Middle_SMARTer_H-_Atail_rep1 File: CRR194200.fq.gz
CRX166172 Middle_Maxima_H-_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194199 Middle_Maxima_H-_rep2 File: CRR194199.fq.gz
CRX166171 Middle_Maxima_H-_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194198 Middle_Maxima_H-_rep1 File: CRR194198.fq.gz
CRX166170 Middle_Maxima_H-_Atail_rep2 Mus musculus OXFORD_NANOPORE MinION SAMC251360
Run accession Run alias Run data file information
CRR194197 Middle_Maxima_H-_Atail_rep2 File: CRR194197.fq.gz
CRX166169 Middle_Maxima_H-_Atail_rep1 Mus musculus OXFORD_NANOPORE MinION SAMC251359
Run accession Run alias Run data file information
CRR194196 Middle_Maxima_H-_Atail_rep1 File: CRR194196.fq.gz
Submitter:Jinyang Zhang (zhangjinyang@biols.ac.cn)
Organization:Beijing Institutes of Life Science
Date submitted:2020-10-09