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| Experiment accession | Title | Taxon name | Platform | Sample accession |
|---|---|---|---|---|
| CRX261124 | ATAC-sequencing of pluripotent stem cell lines from porcine E10 pre-gastrulation epiblasts(pgEpiSCs) | Sus scrofa | Illumina NovaSeq 6000 | SAMC341725 |
| Run accession | Run alias | Run data file information | ||
| CRR306492 | pgEpiSC-1-ATAC |
File: CRR306492_f1.fq.gz File: CRR306492_r2.fq.gz |
||
| CRR306493 | pgEpiSC-2-ATAC |
File: CRR306493_f1.fq.gz File: CRR306493_r2.fq.gz |
||
| CRR306494 | pgEpiSC-3-ATAC |
File: CRR306494_f1.fq.gz File: CRR306494_r2.fq.gz |
||
| CRX261123 | ATAC-sequencing of embryonic fibroblast from porcine E30 fetals(pEFs) | Sus scrofa | Illumina NovaSeq 6000 | SAMC341726 |
| Run accession | Run alias | Run data file information | ||
| CRR306490 | pEF-1-ATAC |
File: CRR306490_f1.fq.gz File: CRR306490_r2.fq.gz |
||
| CRR306491 | pEF-2-ATAC |
File: CRR306491_f1.fq.gz File: CRR306491_r2.fq.gz |
||
| CRX261122 | Whole genome resequencing of pluripotent stem cell lines from porcine E10 pre-gastrulation epiblasts(pgEpiSCs) | Sus scrofa | BGISEQ-500 | SAMC341725 |
| Run accession | Run alias | Run data file information | ||
| CRR306471 | pgEpiSC-A_P10 |
File: CRR306471_f1.gz File: CRR306471_r2.gz |
||
| CRR306472 | pgEpiSC-A_P20 |
File: CRR306472_f1.gz File: CRR306472_r2.gz |
||
| CRR306473 | pgEpiSC-A_P30 |
File: CRR306473_f1.gz File: CRR306473_r2.gz |
||
| CRR306474 | pgEpiSC-A_P40 |
File: CRR306474_f1.gz File: CRR306474_r2.gz |
||
| CRR306475 | pgEpiSC-A_P50 |
File: CRR306475_f1.gz File: CRR306475_r2.gz |
||
| CRR306476 | pgEpiSC-A_P60 |
File: CRR306476_f1.gz File: CRR306476_r2.gz |
||
| CRR306477 | pgEpiSC-A_P70 |
File: CRR306477_f1.gz File: CRR306477_r2.gz |
||
| CRR306478 | pgEpiSC-B1_P10 |
File: CRR306478_f1.gz File: CRR306478_r2.gz |
||
| CRR306479 | pgEpiSC-B1_P20 |
File: CRR306479_f1.gz File: CRR306479_r2.gz |
||
| CRR306480 | pgEpiSC-B1_P30 |
File: CRR306480_f1.gz File: CRR306480_r2.gz |
||
| CRR306481 | pgEpiSC-B1_P40 |
File: CRR306481_f1.gz File: CRR306481_r2.gz |
||
| CRR306482 | pgEpiSC-B1_P50 |
File: CRR306482_f1.gz File: CRR306482_r2.gz |
||
| CRR306483 | pgEpiSC-B1_P60 |
File: CRR306483_f1.gz File: CRR306483_r2.gz |
||
| CRR306484 | pgEpiSC-B1_P70 |
File: CRR306484_f1.gz File: CRR306484_r2.gz |
||
| CRR306485 | pgEpiSC-B2_P10 |
File: CRR306485_f1.gz File: CRR306485_r2.gz |
||
| CRR306486 | pgEpiSC-B2_P30 |
File: CRR306486_f1.gz File: CRR306486_r2.gz |
||
| CRR306487 | pgEpiSC-B3_P10 |
File: CRR306487_f1.gz File: CRR306487_r2.gz |
||
| CRR306488 | pgEpiSC-B3_P30 |
File: CRR306488_f1.gz File: CRR306488_r2.gz |
||
| CRR306489 | pgEpiSC-B3_P50 |
File: CRR306489_f1.gz File: CRR306489_r2.gz |
||
| CRX228988 | ChIP-sequencing of embryonic fibroblast from porcine E30 fetals(pEFs) | Sus scrofa | Illumina HiSeq X Ten | SAMC341726 |
| Run accession | Run alias | Run data file information | ||
| CRR271409 | pEF-1-H3K27ac |
File: CRR271409_f1.fastq.gz File: CRR271409_r2.fastq.gz |
||
| CRR271410 | pEF-1-input |
File: CRR271410_f1.fastq.gz File: CRR271410_r2.fastq.gz |
||
| CRR271411 | pEF-2-H3K27ac |
File: CRR271411_f1.fastq.gz File: CRR271411_r2.fastq.gz |
||
| CRR271412 | pEF-2-input |
File: CRR271412_f1.fastq.gz File: CRR271412_r2.fastq.gz |
||
| CRX228987 | ChIP-sequencing of pluripotent stem cell lines from porcine E10 pre-gastrulation epiblasts(pgEpiSCs) | Sus scrofa | Illumina HiSeq X Ten | SAMC341725 |
| Run accession | Run alias | Run data file information | ||
| CRR271405 | pgEpiSC-1-H3K27ac |
File: CRR271405_f1.fastq.gz File: CRR271405_r2.fastq.gz |
||
| CRR271406 | pgEpiSC-1-input |
File: CRR271406_f1.fastq.gz File: CRR271406_r2.fastq.gz |
||
| CRR271407 | pgEpiSC-4-H3K27ac |
File: CRR271407_f1.fastq.gz File: CRR271407_r2.fastq.gz |
||
| CRR271408 | pgEpiSC-4-input |
File: CRR271408_f1.fastq.gz File: CRR271408_r2.fastq.gz |
||
| CRX228986 | HiC of embryonic fibroblast from porcine E30 fetals(pEFs) | Sus scrofa | BGISEQ-500 | SAMC341726 |
| Run accession | Run alias | Run data file information | ||
| CRR271389 | pEF-1-A |
File: CRR271389_f1.fastq.gz File: CRR271389_r2.fastq.gz |
||
| CRR271390 | pEF-1-B |
File: CRR271390_f1.fastq.gz File: CRR271390_r2.fastq.gz |
||
| CRR271391 | pEF-1-C |
File: CRR271391_f1.fastq.gz File: CRR271391_r2.fastq.gz |
||
| CRR271392 | pEF-1-D |
File: CRR271392_f1.fastq.gz File: CRR271392_r2.fastq.gz |
||
| CRR271393 | pEF-1-E |
File: CRR271393_f1.fastq.gz File: CRR271393_r2.fastq.gz |
||
| CRR271394 | pEF-1-F |
File: CRR271394_f1.fastq.gz File: CRR271394_r2.fastq.gz |
||
| CRR271395 | pEF-1-G |
File: CRR271395_f1.fastq.gz File: CRR271395_r2.fastq.gz |
||
| CRR271396 | pEF-1-H |
File: CRR271396_f1.fastq.gz File: CRR271396_r2.fastq.gz |
||
| CRR271397 | pEF-2-A |
File: CRR271397_f1.fastq.gz File: CRR271397_r2.fastq.gz |
||
| CRR271398 | pEF-2-B |
File: CRR271398_f1.fastq.gz File: CRR271398_r2.fastq.gz |
||
| CRR271399 | pEF-2-C |
File: CRR271399_f1.fastq.gz File: CRR271399_r2.fastq.gz |
||
| CRR271400 | pEF-2-D |
File: CRR271400_f1.fastq.gz File: CRR271400_r2.fastq.gz |
||
| CRR271401 | pEF-2-E |
File: CRR271401_f1.fastq.gz File: CRR271401_r2.fastq.gz |
||
| CRR271402 | pEF-2-F |
File: CRR271402_f1.fastq.gz File: CRR271402_r2.fastq.gz |
||
| CRR271403 | pEF-2-G |
File: CRR271403_f1.fastq.gz File: CRR271403_r2.fastq.gz |
||
| CRR271404 | pEF-2-H |
File: CRR271404_f1.fastq.gz File: CRR271404_r2.fastq.gz |
||
| CRX228985 | HiC of pluripotent stem cell lines from porcine E10 pre-gastrulation epiblasts(pgEpiSCs) | Sus scrofa | BGISEQ-500 | SAMC341725 |
| Run accession | Run alias | Run data file information | ||
| CRR271373 | pgEpiSC-1-A |
File: CRR271373_f1.fastq.gz File: CRR271373_r2.fastq.gz |
||
| CRR271374 | pgEpiSC-1-B |
File: CRR271374_f1.fastq.gz File: CRR271374_r2.fastq.gz |
||
| CRR271375 | pgEpiSC-1-C |
File: CRR271375_f1.fastq.gz File: CRR271375_r2.fastq.gz |
||
| CRR271376 | pgEpiSC-1-D |
File: CRR271376_f1.fastq.gz File: CRR271376_r2.fastq.gz |
||
| CRR271377 | pgEpiSC-2-A |
File: CRR271377_f1.fastq.gz File: CRR271377_r2.fastq.gz |
||
| CRR271378 | pgEpiSC-2-B |
File: CRR271378_f1.fastq.gz File: CRR271378_r2.fastq.gz |
||
| CRR271379 | pgEpiSC-2-C |
File: CRR271379_f1.fastq.gz File: CRR271379_r2.fastq.gz |
||
| CRR271380 | pgEpiSC-2-D |
File: CRR271380_f1.fastq.gz File: CRR271380_r2.fastq.gz |
||
| CRR271381 | pgEpiSC-3-A |
File: CRR271381_f1.fastq.gz File: CRR271381_r2.fastq.gz |
||
| CRR271382 | pgEpiSC-3-B |
File: CRR271382_f1.fastq.gz File: CRR271382_r2.fastq.gz |
||
| CRR271383 | pgEpiSC-3-C |
File: CRR271383_f1.fastq.gz File: CRR271383_r2.fastq.gz |
||
| CRR271384 | pgEpiSC-3-D |
File: CRR271384_f1.fastq.gz File: CRR271384_r2.fastq.gz |
||
| CRR271385 | pgEpiSC-4-A |
File: CRR271385_f1.fastq.gz File: CRR271385_r2.fastq.gz |
||
| CRR271386 | pgEpiSC-4-B |
File: CRR271386_f1.fastq.gz File: CRR271386_r2.fastq.gz |
||
| CRR271387 | pgEpiSC-4-C |
File: CRR271387_f1.fastq.gz File: CRR271387_r2.fastq.gz |
||
| CRR271388 | pgEpiSC-4-D |
File: CRR271388_f1.fastq.gz File: CRR271388_r2.fastq.gz |
||
| CRX228984 | bulk RNA-sequencing of embryonic fibroblast from porcine E30 fetals(pEFs) | Sus scrofa | Illumina HiSeq 4000 | SAMC341726 |
| Run accession | Run alias | Run data file information | ||
| CRR271371 | pEF-1 |
File: CRR271371_f1.fq.gz File: CRR271371_r2.fq.gz |
||
| CRR271372 | pEF-2 |
File: CRR271372_f1.fq.gz File: CRR271372_r2.fq.gz |
||
| CRX228983 | bulk RNA-sequencing of pluripotent stem cell lines from porcine E10 pre-gastrulation epiblasts(pgEpiSCs) | Sus scrofa | Illumina HiSeq 4000 | SAMC341725 |
| Run accession | Run alias | Run data file information | ||
| CRR271367 | pgEpiSC-1 |
File: CRR271367_f1.fq.gz File: CRR271367_r2.fq.gz |
||
| CRR271368 | pgEpiSC-2 |
File: CRR271368_f1.fq.gz File: CRR271368_r2.fq.gz |
||
| CRR271369 | pgEpiSC-3 |
File: CRR271369_f1.fq.gz File: CRR271369_r2.fq.gz |
||
| CRR271370 | pgEpiSC-4 |
File: CRR271370_f1.fq.gz File: CRR271370_r2.fq.gz |
||
| CRX228982 | single cell RNA-sequencing of pluripotent stem cell lines from porcine E10 pre-gastrulation epiblasts(pgEpiSCs) | Sus scrofa | Illumina HiSeq X Ten | SAMC341725 |
| Run accession | Run alias | Run data file information | ||
| CRR271365 | pgEpiSC_low |
File: CRR271365_f1.fq.gz File: CRR271365_r2.fq.gz |
||
| CRR271366 | pgEpiSC_high |
File: CRR271366_f1.fq.gz File: CRR271366_r2.fq.gz |
||
| CRX228981 | single cell RNA-sequencing of porcine preimplantation embryos from embryonic day E0 to E14 | Sus scrofa | Illumina HiSeq X Ten | SAMC341724 |
| Run accession | Run alias | Run data file information | ||
| CRR271345 | P1 |
File: CRR271345_f1.fq.gz File: CRR271345_r2.fq.gz |
||
| CRR271346 | P2 |
File: CRR271346_f1.fq.gz File: CRR271346_r2.fq.gz |
||
| CRR271347 | P3 |
File: CRR271347_f1.fq.gz File: CRR271347_r2.fq.gz |
||
| CRR271348 | P4 |
File: CRR271348_f1.fq.gz File: CRR271348_r2.fq.gz |
||
| CRR271349 | P5 |
File: CRR271349_f1.fq.gz File: CRR271349_r2.fq.gz |
||
| CRR271350 | P6 |
File: CRR271350_f1.fq.gz File: CRR271350_r2.fq.gz |
||
| CRR271351 | P7 |
File: CRR271351_f1.fq.gz File: CRR271351_r2.fq.gz |
||
| CRR271352 | P8 |
File: CRR271352_f1.fq.gz File: CRR271352_r2.fq.gz |
||
| CRR271353 | P9 |
File: CRR271353_f1.fq.gz File: CRR271353_r2.fq.gz |
||
| CRR271354 | P10 |
File: CRR271354_f1.fq.gz File: CRR271354_r2.fq.gz |
||
| CRR271355 | P11 |
File: CRR271355_f1.fq.gz File: CRR271355_r2.fq.gz |
||
| CRR271356 | P12 |
File: CRR271356_f1.fq.gz File: CRR271356_r2.fq.gz |
||
| CRR271357 | P13 |
File: CRR271357_f1.fq.gz File: CRR271357_r2.fq.gz |
||
| CRR271358 | P14 |
File: CRR271358_f1.fq.gz File: CRR271358_r2.fq.gz |
||
| CRR271359 | P15 |
File: CRR271359_f1.fq.gz File: CRR271359_r2.fq.gz |
||
| CRR271360 | P16 |
File: CRR271360_f1.fq.gz File: CRR271360_r2.fq.gz |
||
| CRR271361 | P17 |
File: CRR271361_f1.fq.gz File: CRR271361_r2.fq.gz |
||
| CRR271362 | P18 |
File: CRR271362_f1.fq.gz File: CRR271362_r2.fq.gz |
||
| CRR271363 | P19 |
File: CRR271363_f1.fq.gz File: CRR271363_r2.fq.gz |
||
| CRR271364 | P20 |
File: CRR271364_f1.fq.gz File: CRR271364_r2.fq.gz |
||
CRA003960.xlsx