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CRA004573 Information
Title: Root-associated microbiota under long-term soil amendment applications
BioProject: PRJCA005884 /
Release date: 2021-07-21
Files: 180
File size: 2.59 GB
Publication
Article title
Assembly of root-associated bacterial community in cadmium contaminated soil following five-year consecutive application of soil amendments: Evidences for improved soil health
Journal name
Journal of Hazardous Materials
Year
2021
DOI
10.1016/j.jhazmat.2021.128095
PubMed ID
34952504

Dataset Downlaod
MetaData:
CRA004573.xlsx
Files:
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX258983 16S rDNA amplicon of soil-conditioner of YY17 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433887
Run accession Run alias Run data file information
CRR304124 16S rDNA amplicon of soil-conditioner of YY17 replicate 3 in rhizosphere soil File: CRR304124_f1.fq.gz
File: CRR304124_r2.fq.gz
CRX258982 16S rDNA amplicon of soil-conditioner of YY17 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433886
Run accession Run alias Run data file information
CRR304123 16S rDNA amplicon of soil-conditioner of YY17 replicate 2 in rhizosphere soil File: CRR304123_f1.fq.gz
File: CRR304123_r2.fq.gz
CRX258981 16S rDNA amplicon of soil-conditioner of YY17 replicate 1 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433885
Run accession Run alias Run data file information
CRR304122 16S rDNA amplicon of soil-conditioner of YY17 replicate 1 in rhizosphere soil File: CRR304122_f1.fq.gz
File: CRR304122_r2.fq.gz
CRX258980 16S rDNA amplicon of pig-manure of YY17 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433884
Run accession Run alias Run data file information
CRR304121 16S rDNA amplicon of pig-manure of YY17 replicate 3 in rhizosphere soil File: CRR304121_f1.fq.gz
File: CRR304121_r2.fq.gz
CRX258979 16S rDNA amplicon of pig-manure of YY17 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433883
Run accession Run alias Run data file information
CRR304120 16S rDNA amplicon of pig-manure of YY17 replicate 2 in rhizosphere soil File: CRR304120_f1.fq.gz
File: CRR304120_r2.fq.gz
CRX258978 16S rDNA amplicon of pig-manure of YY17 replicate 1 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433882
Run accession Run alias Run data file information
CRR304119 16S rDNA amplicon of pig-manure of YY17 replicate 1 in rhizosphere soil File: CRR304119_f1.fq.gz
File: CRR304119_r2.fq.gz
CRX258977 16S rDNA amplicon of biochar of YY17 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433881
Run accession Run alias Run data file information
CRR304118 16S rDNA amplicon of biochar of YY17 replicate 3 in rhizosphere soil File: CRR304118_f1.fq.gz
File: CRR304118_r2.fq.gz
CRX258976 16S rDNA amplicon of biochar of YY17 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433880
Run accession Run alias Run data file information
CRR304117 16S rDNA amplicon of biochar of YY17 replicate 2 in rhizosphere soil File: CRR304117_f1.fq.gz
File: CRR304117_r2.fq.gz
CRX258975 16S rDNA amplicon of biochar of YY17 replicate 1 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433879
Run accession Run alias Run data file information
CRR304116 16S rDNA amplicon of biochar of YY17 replicate 1 in rhizosphere soil File: CRR304116_f1.fq.gz
File: CRR304116_r2.fq.gz
CRX258974 16S rDNA amplicon of lime of YY17 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433878
Run accession Run alias Run data file information
CRR304115 16S rDNA amplicon of lime of YY17 replicate 3 in rhizosphere soil File: CRR304115_f1.fq.gz
File: CRR304115_r2.fq.gz
CRX258973 16S rDNA amplicon of lime of YY17 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433877
Run accession Run alias Run data file information
CRR304114 16S rDNA amplicon of lime of YY17 replicate 2 in rhizosphere soil File: CRR304114_f1.fq.gz
File: CRR304114_r2.fq.gz
CRX258972 16S rDNA amplicon of lime of YY17 replicate 1 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433876
Run accession Run alias Run data file information
CRR304113 16S rDNA amplicon of lime of YY17 replicate 1 in rhizosphere soil File: CRR304113_f1.fq.gz
File: CRR304113_r2.fq.gz
CRX258971 16S rDNA amplicon of CK of YY17 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433875
Run accession Run alias Run data file information
CRR304112 16S rDNA amplicon of CK of YY17 replicate 3 in rhizosphere soil File: CRR304112_f1.fq.gz
File: CRR304112_r2.fq.gz
CRX258970 16S rDNA amplicon of CK of YY17 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433874
Run accession Run alias Run data file information
CRR304111 16S rDNA amplicon of CK of YY17 replicate 2 in rhizosphere soil File: CRR304111_f1.fq.gz
File: CRR304111_r2.fq.gz
CRX258969 16S rDNA amplicon of CK of YY17 replicate 1 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433873
Run accession Run alias Run data file information
CRR304110 16S rDNA amplicon of CK of YY17 replicate 1 in rhizosphere soil File: CRR304110_f1.fq.gz
File: CRR304110_r2.fq.gz
CRX258968 16S rDNA amplicon of soil-conditioner of XX03 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433872
Run accession Run alias Run data file information
CRR304109 16S rDNA amplicon of soil-conditioner of XX03 replicate 3 in rhizosphere soil File: CRR304109_f1.fq.gz
File: CRR304109_r2.fq.gz
CRX258967 16S rDNA amplicon of soil-conditioner of XX03 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433871
Run accession Run alias Run data file information
CRR304108 16S rDNA amplicon of soil-conditioner of XX03 replicate 2 in rhizosphere soil File: CRR304108_f1.fq.gz
File: CRR304108_r2.fq.gz
CRX258966 16S rDNA amplicon of soil-conditioner of XX03 replicate 1 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433870
Run accession Run alias Run data file information
CRR304107 16S rDNA amplicon of soil-conditioner of XX03 replicate 1 in rhizosphere soil File: CRR304107_f1.fq.gz
File: CRR304107_r2.fq.gz
CRX258965 16S rDNA amplicon of pig-manure of XX03 replicate 3 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433869
Run accession Run alias Run data file information
CRR304106 16S rDNA amplicon of pig-manure of XX03 replicate 3 in rhizosphere soil File: CRR304106_f1.fq.gz
File: CRR304106_r2.fq.gz
CRX258964 16S rDNA amplicon of pig-manure of XX03 replicate 2 in rhizosphere soil soil metagenome Illumina NovaSeq 6000 SAMC433868
Run accession Run alias Run data file information
CRR304105 16S rDNA amplicon of pig-manure of XX03 replicate 2 in rhizosphere soil File: CRR304105_f1.fq.gz
File: CRR304105_r2.fq.gz
Submitter:Zhongyi Cheng (zycheng2019@zju.edu.cn)
Organization:Zhejiang University
Date submitted:2021-07-20