CRA004909 Information
Title: Whole-genome resequencing of South China tiger
BioProject: PRJCA006384 /
Release date: 2022-07-31
Files: 166
File size: 589.99 GB
Publication
Journal name
BMC Biology
Year
2023
DOI
10.1186/s12915-023-01552-y
PubMed ID
37069598

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX272576 cat Felis catus Illumina HiSeq X Ten SAMC452677
Run accession Run alias Run data file information
CRR319363 cat_1 File: CRR319363_f1.fq.gz
File: CRR319363_r2.fq.gz
CRR319364 cat_2 File: CRR319364_f1.fq.gz
File: CRR319364_r2.fq.gz
CRX272575 ptam_sh5 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452676
Run accession Run alias Run data file information
CRR319361 ptam_sh5_1 File: CRR319361_f1.fq.gz
File: CRR319361_r2.fq.gz
CRR319362 ptam_sh5_2 File: CRR319362_f1.fq.gz
File: CRR319362_r2.fq.gz
CRX272574 ptam_sh4 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452675
Run accession Run alias Run data file information
CRR319359 ptam_sh4_1 File: CRR319359_f1.fq.gz
File: CRR319359_r2.fq.gz
CRR319360 ptam_sh4_2 File: CRR319360_f1.fq.gz
File: CRR319360_r2.fq.gz
CRX272573 ptam_sh3 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452674
Run accession Run alias Run data file information
CRR319357 ptam_sh3_1 File: CRR319357_f1.fq.gz
File: CRR319357_r2.fq.gz
CRR319358 ptam_sh3_2 File: CRR319358_f1.fq.gz
File: CRR319358_r2.fq.gz
CRX272572 ptam_sh2 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452673
Run accession Run alias Run data file information
CRR319355 ptam_sh2_1 File: CRR319355_f1.fq.gz
File: CRR319355_r2.fq.gz
CRR319356 ptam_sh2_2 File: CRR319356_f1.fq.gz
File: CRR319356_r2.fq.gz
CRX272571 ptam_sh1 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452672
Run accession Run alias Run data file information
CRR319353 ptam_sh1_1 File: CRR319353_f1.fq.gz
File: CRR319353_r2.fq.gz
CRR319354 ptam_sh1_2 File: CRR319354_f1.fq.gz
File: CRR319354_r2.fq.gz
CRX272570 ptam_gz7 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452671
Run accession Run alias Run data file information
CRR319350 ptam_gz7_1 File: CRR319350_f1.fq.gz
File: CRR319350_r2.fq.gz
CRR319351 ptam_gz7_2 File: CRR319351_f1.fq.gz
File: CRR319351_r2.fq.gz
CRR319352 ptam_gz7_3 File: CRR319352_f1.fq.gz
File: CRR319352_r2.fq.gz
CRX272569 ptam_gz6 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452670
Run accession Run alias Run data file information
CRR319347 ptam_gz6_1 File: CRR319347_f1.fq.gz
File: CRR319347_r2.fq.gz
CRR319348 ptam_gz6_2 File: CRR319348_f1.fq.gz
File: CRR319348_r2.fq.gz
CRR319349 ptam_gz6_3 File: CRR319349_f1.fq.gz
File: CRR319349_r2.fq.gz
CRX272568 ptam_gz5 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452669
Run accession Run alias Run data file information
CRR319345 ptam_gz5_1 File: CRR319345_f1.fq.gz
File: CRR319345_r2.fq.gz
CRR319346 ptam_gz5_2 File: CRR319346_f1.fq.gz
File: CRR319346_r2.fq.gz
CRX272567 ptam_gz4 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452668
Run accession Run alias Run data file information
CRR319342 ptam_gz4_1 File: CRR319342_f1.fq.gz
File: CRR319342_r2.fq.gz
CRR319343 ptam_gz4_2 File: CRR319343_f1.fq.gz
File: CRR319343_r2.fq.gz
CRR319344 ptam_gz4_3 File: CRR319344_f1.fq.gz
File: CRR319344_r2.fq.gz
CRX272566 ptam_gz3 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452667
Run accession Run alias Run data file information
CRR319339 ptam_gz3_1 File: CRR319339_f1.fq.gz
File: CRR319339_r2.fq.gz
CRR319340 ptam_gz3_2 File: CRR319340_f1.fq.gz
File: CRR319340_r2.fq.gz
CRR319341 ptam_gz3_3 File: CRR319341_f1.fq.gz
File: CRR319341_r2.fq.gz
CRX272565 ptam_gz2 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452666
Run accession Run alias Run data file information
CRR319336 ptam_gz2_1 File: CRR319336_f1.fq.gz
File: CRR319336_r2.fq.gz
CRR319337 ptam_gz2_2 File: CRR319337_f1.fq.gz
File: CRR319337_r2.fq.gz
CRR319338 ptam_gz2_3 File: CRR319338_f1.fq.gz
File: CRR319338_r2.fq.gz
CRX272564 ptam_gz1 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452665
Run accession Run alias Run data file information
CRR319333 ptam_gz1_1 File: CRR319333_f1.fq.gz
File: CRR319333_r2.fq.gz
CRR319334 ptam_gz1_2 File: CRR319334_f1.fq.gz
File: CRR319334_r2.fq.gz
CRR319335 ptam_gz1_3 File: CRR319335_f1.fq.gz
File: CRR319335_r2.fq.gz
CRX272563 ptam_ly7 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452664
Run accession Run alias Run data file information
CRR319330 ptam_ly7_1 File: CRR319330_f1.fq.gz
File: CRR319330_r2.fq.gz
CRR319331 ptam_ly7_2 File: CRR319331_f1.fq.gz
File: CRR319331_r2.fq.gz
CRR319332 ptam_ly7_3 File: CRR319332_f1.fq.gz
File: CRR319332_r2.fq.gz
CRX272562 ptam_ly6 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452663
Run accession Run alias Run data file information
CRR319327 ptam_ly6_1 File: CRR319327_f1.fq.gz
File: CRR319327_r2.fq.gz
CRR319328 ptam_ly6_2 File: CRR319328_f1.fq.gz
File: CRR319328_r2.fq.gz
CRR319329 ptam_ly6_3 File: CRR319329_f1.fq.gz
File: CRR319329_r2.fq.gz
CRX272561 ptam_ly5 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452662
Run accession Run alias Run data file information
CRR319324 ptam_ly5_1 File: CRR319324_f1.fq.gz
File: CRR319324_r2.fq.gz
CRR319325 ptam_ly5_2 File: CRR319325_f1.fq.gz
File: CRR319325_r2.fq.gz
CRR319326 ptam_ly5_3 File: CRR319326_f1.fq.gz
File: CRR319326_r2.fq.gz
CRX272560 ptam_ly4 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452661
Run accession Run alias Run data file information
CRR319321 ptam_ly4_1 File: CRR319321_f1.fq.gz
File: CRR319321_r2.fq.gz
CRR319322 ptam_ly4_2 File: CRR319322_f1.fq.gz
File: CRR319322_r2.fq.gz
CRR319323 ptam_ly4_3 File: CRR319323_f1.fq.gz
File: CRR319323_r2.fq.gz
CRX272559 ptam_ly3 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452660
Run accession Run alias Run data file information
CRR319318 ptam_ly3_1 File: CRR319318_f1.fq.gz
File: CRR319318_r2.fq.gz
CRR319319 ptam_ly3_2 File: CRR319319_f1.fq.gz
File: CRR319319_r2.fq.gz
CRR319320 ptam_ly3_3 File: CRR319320_f1.fq.gz
File: CRR319320_r2.fq.gz
CRX272558 ptam_ly2 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452659
Run accession Run alias Run data file information
CRR319315 ptam_ly2_1 File: CRR319315_f1.fq.gz
File: CRR319315_r2.fq.gz
CRR319316 ptam_ly2_2 File: CRR319316_f1.fq.gz
File: CRR319316_r2.fq.gz
CRR319317 ptam_ly2_3 File: CRR319317_f1.fq.gz
File: CRR319317_r2.fq.gz
CRX272557 ptam_ly1 Panthera tigris amoyensis Illumina HiSeq X Ten SAMC452658
Run accession Run alias Run data file information
CRR319312 ptam_ly1_1 File: CRR319312_f1.fq.gz
File: CRR319312_r2.fq.gz
CRR319313 ptam_ly1_2 File: CRR319313_f1.fq.gz
File: CRR319313_r2.fq.gz
CRR319314 ptam_ly1_3 File: CRR319314_f1.fq.gz
File: CRR319314_r2.fq.gz
Submitter:Chen Wang (wangchen_gzzoo@sina.com)
Organization:Guangzhou Zoo & Guangzhou Wildlife Research Center
Date submitted:2021-09-03