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Experiment information
Accession CRX305066
Organism Cocos nucifera
Title Dwarf coconut ont wgs data
BioProject PRJCA005463
BioSample SAMC535900
Platform OXFORD_NANOPORE PromethION
Library
Library name Construction protocol Strategy Source Selection Layout
Genomic DNA was extracted using a QIAGEN® Genomic DNA extraction kit (Cat#13323, QIAGEN) according to the standard operating procedure provided by the manufacturer. The extracted DNA was detected by a NanoDrop™ One UV-Vis spectrophotometer (Thermo Fisher Scientific, USA) for DNA purity (OD260/280 ranging from 1.8 to 2.0 and OD 260/230 is between 2.0 and 2.2), then Qubit® 3.0 Fluorometer (Invitrogen, USA) was used to quantify DNA accurately. After that, long DNA fragments were selected and collected using the BluePippin system (Sage Science, USA). Recycled DNA fragments were subjected to end repair and adaptor ligation by SQK-LSK109 kit. WGS GENOMIC RANDOM SINGLE
Processing
Release date2021-12-14
Run
Run accession Run data file information
File nameFile size (MB)
CRR354324 CRR354324.fq.gz 9,060.51
CRR354325 CRR354325.fq.gz 4,297.01
CRR354326 CRR354326.fq.gz 2,254.76
CRR354327 CRR354327.fq.gz 3,429.81
CRR354328 CRR354328.fq.gz 7,030.03
CRR354329 CRR354329.fq.gz 7,626.56
CRR354330 CRR354330.fq.gz 8,716.81
CRR354331 CRR354331.fq.gz 7,878.25
CRR354332 CRR354332.fq.gz 6,390.57
CRR354333 CRR354333.fq.gz 8,820.74
CRR354334 CRR354334.fq.gz 8,225.97
CRR354335 CRR354335.fq.gz 6,762.8
CRR354336 CRR354336.fq.gz 6,392.41
CRR354337 CRR354337.fq.gz 7,104.31
CRR354338 CRR354338.fq.gz 4,689.08
CRR354339 CRR354339.fq.gz 6,947.76
CRR354340 CRR354340.fq.gz 6,548.99
CRR354341 CRR354341.fq.gz 4,609.99
CRR354342 CRR354342.fq.gz 8,119.08
CRR354343 CRR354343.fq.gz 4,538.32
CRR354344 CRR354344.fq.gz 5,355.09
CRR354345 CRR354345.fq.gz 4,997.89
CRR354346 CRR354346.fq.gz 9,828.37
CRR354347 CRR354347.fq.gz 10,385.29
CRR354348 CRR354348.fq.gz 7,239.83
CRR354349 CRR354349.fq.gz 6,459.01
CRR354350 CRR354350.fq.gz 7,940.63
CRR354351 CRR354351.fq.gz 6,652.57
CRR354352 CRR354352.fq.gz 9,397.43
CRR354353 CRR354353.fq.gz 3,975.14
CRR354354 CRR354354.fq.gz 11,245.01
CRR354355 CRR354355.fq.gz 9,059.3
CRR354356 CRR354356.fq.gz 9,794.67
SubmitterLingling Chen (bioinfo@mail.hzau.edu.cn)
OrganizationHuazhong Agricultural University
Date submitted2021-12-14
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