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CRA006472 Information
Title: Diploid Genome Architecture Reveals Allelic Bias of the Hybrid Pig
BioProject: PRJCA008579 /
Release date: 2023-08-07
Files: 644
File size: 38259.48 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX443058 BT2_liver_CTCF Sus scrofa Illumina HiSeq X Ten SAMC628794
Run accession Run alias Run data file information
CRR502458 BT2_liver_CTCF File: CRR502458_f1.fq.gz
File: CRR502458_r2.fq.gz
CRX443057 BT1_liver_CTCF Sus scrofa Illumina HiSeq X Ten SAMC628789
Run accession Run alias Run data file information
CRR502457 BT1_liver_CTCF File: CRR502457_f1.fq.gz
File: CRR502457_r2.fq.gz
CRX443056 TB2_liver_CTCF Sus scrofa Illumina HiSeq X Ten SAMC628779
Run accession Run alias Run data file information
CRR502456 TB2_liver_CTCF File: CRR502456_f1.fq.gz
File: CRR502456_r2.fq.gz
CRX443055 TB1_liver_CTCF Sus scrofa Illumina HiSeq X Ten SAMC628774
Run accession Run alias Run data file information
CRR502455 TB1_liver_CTCF File: CRR502455_f1.fq.gz
File: CRR502455_r2.fq.gz
CRX443054 BT2_ONT Sus scrofa OXFORD_NANOPORE PromethION SAMC628794
Run accession Run alias Run data file information
CRR502449 BT2-1_ONT File: CRR502449.fq.gz
CRR502450 BT2-2_ONT File: CRR502450.fq.gz
CRR502451 BT2-3_ONT File: CRR502451.fq.gz
CRR502452 BT2-4_ONT File: CRR502452.fq.gz
CRR502453 BT2-5_ONT File: CRR502453.fq.gz
CRR502454 BT2-6_ONT File: CRR502454.fq.gz
CRX443053 BT1_ONT Sus scrofa OXFORD_NANOPORE PromethION SAMC628789
Run accession Run alias Run data file information
CRR502444 BT1-1_ONT File: CRR502444.fq.gz
CRR502445 BT1-2_ONT File: CRR502445.fq.gz
CRR502446 BT1-3_ONT File: CRR502446.fq.gz
CRR502447 BT1-4_ONT File: CRR502447.fq.gz
CRR502448 BT1-5_ONT File: CRR502448.fq.gz
CRX443052 TB2_ONT Sus scrofa OXFORD_NANOPORE PromethION SAMC628779
Run accession Run alias Run data file information
CRR502439 TB2-1_ONT File: CRR502439.fq.gz
CRR502440 TB2-2_ONT File: CRR502440.fq.gz
CRR502441 TB2-3_ONT File: CRR502441.fq.gz
CRR502442 TB2-4_ONT File: CRR502442.fq.gz
CRR502443 TB2-5_ONT File: CRR502443.fq.gz
CRX443051 TB1_ONT Sus scrofa OXFORD_NANOPORE PromethION SAMC628774
Run accession Run alias Run data file information
CRR502433 TB1-1_ONT File: CRR502433.fq.gz
CRR502434 TB1-2_ONT File: CRR502434.fq.gz
CRR502435 TB1-3_ONT File: CRR502435.fq.gz
CRR502436 TB1-4_ONT File: CRR502436.fq.gz
CRR502437 TB1-5_ONT File: CRR502437.fq.gz
CRR502438 TB1-6_ONT File: CRR502438.fq.gz
CRX392064 BT2_muscle_Input Sus scrofa Illumina HiSeq X Ten SAMC628795
Run accession Run alias Run data file information
CRR449683 BT2_muscle_Input File: CRR449683_f1.fq.gz
File: CRR449683_r2.fq.gz
CRX392063 BT1_muscle_Input Sus scrofa Illumina HiSeq X Ten SAMC628790
Run accession Run alias Run data file information
CRR449682 BT1_muscle_Input File: CRR449682_f1.fq.gz
File: CRR449682_r2.fq.gz
CRX392062 TB2_muscle_Input Sus scrofa Illumina HiSeq X Ten SAMC628780
Run accession Run alias Run data file information
CRR449681 TB2_muscle_Input File: CRR449681_f1.fq.gz
File: CRR449681_r2.fq.gz
CRX392061 TB1_muscle_Input Sus scrofa Illumina HiSeq X Ten SAMC628775
Run accession Run alias Run data file information
CRR449680 TB1_muscle_Input File: CRR449680_f1.fq.gz
File: CRR449680_r2.fq.gz
CRX392060 BT2_liver_Input Sus scrofa Illumina HiSeq X Ten SAMC628794
Run accession Run alias Run data file information
CRR449678 BT2_liver_Input-1 File: CRR449678_f1.fq.gz
File: CRR449678_r2.fq.gz
CRR449679 BT2_liver_Input-2 File: CRR449679_f1.fq.gz
File: CRR449679_r2.fq.gz
CRX392059 BT1_liver_Input Sus scrofa Illumina HiSeq X Ten SAMC628789
Run accession Run alias Run data file information
CRR449676 BT1_liver_Input-1 File: CRR449676_f1.fq.gz
File: CRR449676_r2.fq.gz
CRR449677 BT1_liver_Input-2 File: CRR449677_f1.fq.gz
File: CRR449677_r2.fq.gz
CRX392058 TB2_liver_Input Sus scrofa Illumina HiSeq X Ten SAMC628779
Run accession Run alias Run data file information
CRR449674 TB2_liver_Input-1 File: CRR449674_f1.fq.gz
File: CRR449674_r2.fq.gz
CRR449675 TB2_liver_Input-2 File: CRR449675_f1.fq.gz
File: CRR449675_r2.fq.gz
CRX392057 TB1_liver_Input Sus scrofa Illumina HiSeq X Ten SAMC628774
Run accession Run alias Run data file information
CRR449672 TB1_liver_Input-1 File: CRR449672_f1.fq.gz
File: CRR449672_r2.fq.gz
CRR449673 TB1_liver_Input-2 File: CRR449673_f1.fq.gz
File: CRR449673_r2.fq.gz
CRX392056 BT2_brain_Input Sus scrofa Illumina HiSeq X Ten SAMC628793
Run accession Run alias Run data file information
CRR449671 BT2_brain_Input File: CRR449671_f1.fq.gz
File: CRR449671_r2.fq.gz
CRX392055 BT1_brain_Input Sus scrofa Illumina HiSeq X Ten SAMC628788
Run accession Run alias Run data file information
CRR449670 BT1_brain_Input File: CRR449670_f1.fq.gz
File: CRR449670_r2.fq.gz
CRX392054 TB2_brain_Input Sus scrofa Illumina HiSeq X Ten SAMC628778
Run accession Run alias Run data file information
CRR449669 TB2_brain_Input File: CRR449669_f1.fq.gz
File: CRR449669_r2.fq.gz
CRX392053 TB1_brain_Input Sus scrofa Illumina HiSeq X Ten SAMC628773
Run accession Run alias Run data file information
CRR449668 TB1_brain_Input File: CRR449668_f1.fq.gz
File: CRR449668_r2.fq.gz
Submitter:Long Jin (longjin@sicau.edu.cn)
Organization:Sichuan Agricultural University
Date submitted:2022-03-08