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CRA006587 Information
Title: Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding
BioProject: PRJCA008874 /
Release date: 2022-04-10
Files: 76
File size: 1401.81 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX398531 mNGS sequencing WH04 Severe acute respiratory syndrome coronavirus 2 DNBSEQ-T7 SAMC703649
Run accession Run alias Run data file information
CRR456602 mNGS sequencing WH04-01 File: CRR456602_f1.fastq.gz
File: CRR456602_r2.fastq.gz
CRR456603 mNGS sequencing WH04-02 File: CRR456603_f1.fastq.gz
File: CRR456603_r2.fastq.gz
CRR456604 mNGS sequencing WH04-03 File: CRR456604_f1.fastq.gz
File: CRR456604_r2.fastq.gz
CRR456605 mNGS sequencing WH04-04 File: CRR456605_f1.fastq.gz
File: CRR456605_r2.fastq.gz
CRX398530 mNGS sequencing WH03 Severe acute respiratory syndrome coronavirus 2 DNBSEQ-T7 SAMC703648
Run accession Run alias Run data file information
CRR456598 mNGS sequencing WH03-01 File: CRR456598_f1.fastq.gz
File: CRR456598_r2.fastq.gz
CRR456599 mNGS sequencing WH03-02 File: CRR456599_f1.fastq.gz
File: CRR456599_r2.fastq.gz
CRR456600 mNGS sequencing WH03-03 File: CRR456600_f1.fastq.gz
File: CRR456600_r2.fastq.gz
CRR456601 mNGS sequencing WH03-04 File: CRR456601_f1.fastq.gz
File: CRR456601_r2.fastq.gz
CRX398529 mNGS sequencing WH02 Severe acute respiratory syndrome coronavirus 2 DNBSEQ-T7 SAMC703647
Run accession Run alias Run data file information
CRR456588 mNGS sequencing WH02-01 File: CRR456588_f1.fastq.gz
File: CRR456588_r2.fastq.gz
CRR456589 mNGS sequencing WH02-02 File: CRR456589_f1.fastq.gz
File: CRR456589_r2.fastq.gz
CRR456590 mNGS sequencing WH02-03 File: CRR456590_f1.fastq.gz
File: CRR456590_r2.fastq.gz
CRR456591 mNGS sequencing WH02-04 File: CRR456591_f1.fastq.gz
File: CRR456591_r2.fastq.gz
CRR456592 mNGS sequencing WH02-05 File: CRR456592_f1.fastq.gz
File: CRR456592_r2.fastq.gz
CRR456593 mNGS sequencing WH02-06 File: CRR456593_f1.fastq.gz
File: CRR456593_r2.fastq.gz
CRR456594 mNGS sequencing WH02-07 File: CRR456594_f1.fastq.gz
File: CRR456594_r2.fastq.gz
CRR456595 mNGS sequencing WH02-08 File: CRR456595_f1.fastq.gz
File: CRR456595_r2.fastq.gz
CRR456596 mNGS sequencing WH02-09 File: CRR456596_f1.fastq.gz
File: CRR456596_r2.fastq.gz
CRR456597 mNGS sequencing WH02-10 File: CRR456597_f1.fastq.gz
File: CRR456597_r2.fastq.gz
CRX398528 mNGS sequencing WH01 Severe acute respiratory syndrome coronavirus 2 DNBSEQ-T7 SAMC703646
Run accession Run alias Run data file information
CRR456574 mNGS sequencing WH01-01 File: CRR456574_f1.fastq.gz
File: CRR456574_r2.fastq.gz
CRR456575 mNGS sequencing WH01-02 File: CRR456575_f1.fastq.gz
File: CRR456575_r2.fastq.gz
CRR456576 mNGS sequencing WH01-03 File: CRR456576_f1.fastq.gz
File: CRR456576_r2.fastq.gz
CRR456577 mNGS sequencing WH01-04 File: CRR456577_f1.fastq.gz
File: CRR456577_r2.fastq.gz
CRR456578 mNGS sequencing WH01-05 File: CRR456578_f1.fastq.gz
File: CRR456578_r2.fastq.gz
CRR456579 mNGS sequencing WH01-06 File: CRR456579_f1.fastq.gz
File: CRR456579_r2.fastq.gz
CRR456580 mNGS sequencing WH01-07 File: CRR456580_f1.fastq.gz
File: CRR456580_r2.fastq.gz
CRR456581 mNGS sequencing WH01-08 File: CRR456581_f1.fastq.gz
File: CRR456581_r2.fastq.gz
CRR456582 mNGS sequencing WH01-09 File: CRR456582_f1.fastq.gz
File: CRR456582_r2.fastq.gz
CRR456583 mNGS sequencing WH01-10 File: CRR456583_f1.fastq.gz
File: CRR456583_r2.fastq.gz
CRR456584 mNGS sequencing WH01-11 File: CRR456584_f1.fastq.gz
File: CRR456584_r2.fastq.gz
CRR456585 mNGS sequencing WH01-12 File: CRR456585_f1.fastq.gz
File: CRR456585_r2.fastq.gz
CRR456586 mNGS sequencing WH01-13 File: CRR456586_f1.fastq.gz
File: CRR456586_r2.fastq.gz
CRR456587 mNGS sequencing WH01-14 File: CRR456587_f1.fastq.gz
File: CRR456587_r2.fastq.gz
CRX398527 mNGS sequencing YS8011 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC703645
Run accession Run alias Run data file information
CRR456572 mNGS sequencing YS8011-01 File: CRR456572_f1.fastq.gz
File: CRR456572_r2.fastq.gz
CRR456573 mNGS sequencing YS8011-02 File: CRR456573_f1.fastq.gz
File: CRR456573_r2.fastq.gz
CRX398526 mNGS sequencing WH19008 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC703644
Run accession Run alias Run data file information
CRR456571 mNGS sequencing WH19008 File: CRR456571_f1.fastq.gz
File: CRR456571_r2.fastq.gz
CRX398525 mNGS sequencing WH19004 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC703643
Run accession Run alias Run data file information
CRR456570 mNGS sequencing WH19004 File: CRR456570_f1.fastq.gz
File: CRR456570_r2.fastq.gz
CRX398524 mNGS sequencing WH19002 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC703642
Run accession Run alias Run data file information
CRR456569 mNGS sequencing WH19002 File: CRR456569_f1.fastq.gz
File: CRR456569_r2.fastq.gz
CRX398523 mNGS sequencing WH19001 and WH19005 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC703641
Run accession Run alias Run data file information
CRR456568 mNGS sequencing WH19001 and WH19005 File: CRR456568_f1.fastq.gz
File: CRR456568_r2.fastq.gz
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Submitter:Changcheng Wu (wucc@ivdc.chinacdc.cn)
Organization:China CDC
Date submitted:2022-04-04