| Accession | CRX474753 |
| Organism | Orobanche cernua var. cumana |
| Title | Hi-C sequence for Orobanche cumana |
| BioProject | PRJCA008847 |
| BioSample | SAMC695116 |
| Platform | MGISEQ-2000RS |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
Hi-C pipeline included crosslinking, chromatin digestion with MboI (New England BioLabs, MA), labeling of DNA ends, ligation, purification, shearing, and biotin pull-down. The Hi-C libraries were sequenced on an MGI-SEQ 2000 (MGI Tech, Shenzhen, China) platform in the 150-bp paired-end mode, resulting in approximately 100 × coverage. |
Hi-C |
GENOMIC |
RANDOM |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| Release date | 2022-07-28 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR535109 |
CRR535109_f1.fq.gz
CRR535109_r2.fq.gz
|
62,630.45
61,999.96
|
|
| Submitter | Yuxing Xu (xuyuxing@mail.kib.ac.cn) |
|---|
| Organization | Chinese Academy of Sciences |
|---|
| Date submitted | 2022-07-27 |
|---|
