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CRA008027 Information
Title: Two enhancers synergistically regulate HoxB genes expressions and retinoic acid-induced early ESCs differentiation through 3D chromatin structure
BioProject: PRJCA011582 /
Release date: 2022-09-01
Files: 44
File size: 75.93 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX499897 WT-2-RA-24h-H3K4me3-chip-seq Mus musculus Illumina NovaSeq 6000 SAMC867618
Run accession Run alias Run data file information
CRR563846 WT-2-RA-24h-H3K4me3-chip-seq File: CRR563846_f1.fastq.gz
File: CRR563846_r2.fastq.gz
CRX499896 WT-1-RA-24h-H3K4me3-chip-seq Mus musculus Illumina NovaSeq 6000 SAMC867617
Run accession Run alias Run data file information
CRR563845 WT-1-RA-24h-H3K4me3-chip-seq File: CRR563845_f1.fastq.gz
File: CRR563845_r2.fastq.gz
CRX499895 WT-2-RA-24h-H3K27ac-chip-seq Mus musculus Illumina NovaSeq 6000 SAMC867616
Run accession Run alias Run data file information
CRR563844 WT-2-RA-24h-H3K27ac-chip-seq File: CRR563844_f1.fastq.gz
File: CRR563844_r2.fastq.gz
CRX499894 WT-1-RA-24h-H3K27ac-chip-seq Mus musculus Illumina NovaSeq 6000 SAMC867615
Run accession Run alias Run data file information
CRR563843 WT-1-RA-24h-H3K27ac-chip-seq File: CRR563843_f1.fastq.gz
File: CRR563843_r2.fastq.gz
CRX499893 2-3-WT-4C-Rep2 Mus musculus Illumina NovaSeq 6000 SAMC867614
Run accession Run alias Run data file information
CRR563842 2-3-WT-4C-Rep2 File: CRR563842_f1.fastq.gz
File: CRR563842_r2.fastq.gz
CRX499892 2-3-WT-4C-Rep1 Mus musculus Illumina NovaSeq 6000 SAMC867613
Run accession Run alias Run data file information
CRR563841 2-3-WT-4C-Rep1 File: CRR563841_f1.fastq.gz
File: CRR563841_r2.fastq.gz
CRX499891 2-1-WT-4C-Rep2 Mus musculus Illumina NovaSeq 6000 SAMC867612
Run accession Run alias Run data file information
CRR563840 2-1-WT-4C-Rep2 File: CRR563840_f1.fastq.gz
File: CRR563840_r2.fastq.gz
CRX499890 2-1-WT-4C-Rep1 Mus musculus Illumina NovaSeq 6000 SAMC867611
Run accession Run alias Run data file information
CRR563839 2-1-WT-4C-Rep1 File: CRR563839_f1.fastq.gz
File: CRR563839_r2.fastq.gz
CRX499889 1-1-WT-4C-Rep2 Mus musculus Illumina NovaSeq 6000 SAMC867610
Run accession Run alias Run data file information
CRR563838 1-1-WT-4C-Rep2 File: CRR563838_f1.fastq.gz
File: CRR563838_r2.fastq.gz
CRX499888 1-1-WT-4C-Rep1 Mus musculus Illumina NovaSeq 6000 SAMC867609
Run accession Run alias Run data file information
CRR563837 1-1-WT-4C-Rep1 File: CRR563837_f1.fastq.gz
File: CRR563837_r2.fastq.gz
CRX499887 D-KO-RNA-seq-Rep3 Mus musculus Illumina NovaSeq 6000 SAMC867608
Run accession Run alias Run data file information
CRR563836 D-KO-RNA-seq-Rep3 File: CRR563836_f1.fastq.gz
File: CRR563836_r2.fastq.gz
CRX499886 D-KO-RNA-seq-Rep2 Mus musculus Illumina NovaSeq 6000 SAMC867607
Run accession Run alias Run data file information
CRR563835 D-KO-RNA-seq-Rep2 File: CRR563835_f1.fastq.gz
File: CRR563835_r2.fastq.gz
CRX499885 D-KO-RNA-seq-Rep1 Mus musculus Illumina NovaSeq 6000 SAMC867606
Run accession Run alias Run data file information
CRR563834 D-KO-RNA-seq-Rep1 File: CRR563834_f1.fastq.gz
File: CRR563834_r2.fastq.gz
CRX499884 E2-KO-RNA-seq-Rep3 Mus musculus Illumina NovaSeq 6000 SAMC867605
Run accession Run alias Run data file information
CRR563833 E2-KO-RNA-seq-Rep3 File: CRR563833_f1.fastq.gz
File: CRR563833_r2.fastq.gz
CRX499883 E2-KO-RNA-seq-Rep2 Mus musculus Illumina NovaSeq 6000 SAMC867604
Run accession Run alias Run data file information
CRR563832 E2-KO-RNA-seq-Rep2 File: CRR563832_f1.fastq.gz
File: CRR563832_r2.fastq.gz
CRX499882 E2-KO-RNA-seq-Rep1 Mus musculus Illumina NovaSeq 6000 SAMC867603
Run accession Run alias Run data file information
CRR563831 E2-KO-RNA-seq-Rep1 File: CRR563831_f1.fastq.gz
File: CRR563831_r2.fastq.gz
CRX499881 E1-KO-RNA-seq-Rep3 Mus musculus Illumina NovaSeq 6000 SAMC867602
Run accession Run alias Run data file information
CRR563830 E1-KO-RNA-seq-Rep3 File: CRR563830_f1.fastq.gz
File: CRR563830_r2.fastq.gz
CRX499880 E1-KO-RNA-seq-Rep2 Mus musculus Illumina NovaSeq 6000 SAMC867601
Run accession Run alias Run data file information
CRR563829 E1-KO-RNA-seq-Rep2 File: CRR563829_f1.fastq.gz
File: CRR563829_r2.fastq.gz
CRX499879 E1-KO-RNA-seq-Rep1 Mus musculus Illumina NovaSeq 6000 SAMC867600
Run accession Run alias Run data file information
CRR563828 E1-KO-RNA-seq-Rep1 File: CRR563828_f1.fastq.gz
File: CRR563828_r2.fastq.gz
CRX499878 WT-RNA-seq-Rep3 Mus musculus Illumina NovaSeq 6000 SAMC867599
Run accession Run alias Run data file information
CRR563827 WT-RNA-seq-Rep3 File: CRR563827_f1.fastq.gz
File: CRR563827_r2.fastq.gz
Submitter:Wenbin Wang (sciencedb@gibh.ac.cn)
Organization:Nankai University
Date submitted:2022-08-31