logo
Experiment information
Accession CRX510884
Organism Bacteria
Title R199
BioProject PRJCA012074
BioSample SAMC898384
Platform DNBSEQ-T7
Library
Library name Construction protocol Strategy Source Selection Layout
After Sample QC, 500ng of Meta DNA was fragmented by ultrasound on Covaris E220 (Covaris ,Brighton,UK), then selected to 300 bp ~886 bp by magnet beads size -selection. The selected DNA fragments were repaired, then ligated with indexed adaptor. The ligation product was amplified by PCR, hybridized with exon probe, and captured by streptavidin beads, The Captured DNA was amplified again by PCR, and circularized to get single -stranded circular(ssCir) librany. The ssCir library was then amplified through rolling circle amplification (RCA) to obtain DNA anobal(DNB). he DNB was then loaded to flowcell, and sequenced by DNBSEQ Platform. WGS METAGENOMIC PCR PAIRED
Processing Planned read length (bp) for mate 1: 100
Planned read length (bp) for mate 2: 100
Release date2024-09-21
Run
Run accession Run data file information
File nameFile size (MB)
CRR575500 CRR575500_f1.fq.gz
CRR575500_r2.fq.gz
9,827.76
9,679.89
SubmitterYi-Xuan Tu (tuyx@webmail.hzau.edu.cn)
OrganizationHuazhong Agricultural University
Date submitted2022-10-04
Related experiments
Experiments(206)