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Experiment information
Accession CRX552373
Organism Rattus norvegicus
Title overy_ST_3
BioProject PRJCA013022
BioSample SAMC999634
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
The rat ovary was chopped using scalpels into pieces of 0.3 mm3 and digested in DMEM/F12 (Thermo Fisher Scientific) containing 5% FBS,1 mg/mL collagenase IA (Sigma-Aldrich), 50 μg/mL Liberase and 1000 U DNase I (Roche, Sigma-Aldrich) in a shaking 37 °C incubator for 40 min 220rpm.Digestion was stopped with medium containing 10% FBS and cell suspension was centrifuged for 7 min on 300 × g.Discard the supernatant and cells were resuspend in DPBS, 2% FBS. The cell precipitate was passed through a 40 μm cell strainer (Millipore, USA).Red cell lysis solution(Solarbio, China) was added to the cell suspension for 5 min. Then the cell suspension was centrifuged for 5 min on 300 × g and resuspend in DPBS, 0.04%BSA.The cells were counted and the cell viability was calculated with Trypan Blue. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PCR PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2024-11-07
Run
Run accession Run data file information
File nameFile size (MB)
CRR617386 CRR617386_f1.fastq.gz
CRR617386_r2.fastq.gz
20,077.41
19,980.08
Submitteryang ying (yingyang@big.ac.cn)
OrganizationBeijing Institute of Genomics
Date submitted2022-11-21
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