Accession | CRX575969 |
Organism | Mus musculus |
Title | Organoid_OSCAR_DM_pilot |
BioProject | PRJCA014442 |
BioSample | SAMC1052335 |
Platform | Illumina NovaSeq 6000 |
Library |
Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. |
RNA-Seq |
TRANSCRIPTOMIC SINGLE CELL |
PolyA |
PAIRED
|
|
Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
Release date | 2023-01-27 |
Run |
Run accession |
Run data file information |
File name | File size (MB) |
CRR644368 |
CRR644368_f1.fastq.gz
CRR644368_r2.fastq.gz
|
10,921.43
11,204.93
|
CRR644369 |
CRR644369_f1.fastq.gz
CRR644369_r2.fastq.gz
|
13,536.65
14,140.03
|
CRR644370 |
CRR644370_f1.fastq.gz
CRR644370_r2.fastq.gz
|
15,009.29
15,644.27
|
CRR644371 |
CRR644371_f1.fastq.gz
CRR644371_r2.fastq.gz
|
5,276.91
5,613.4
|
|
Submitter | Jun Cao (caojundudu@qq.com) |
Organization | Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College |
Date submitted | 2023-01-20 |