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Experiment information
Accession CRX575971
Organism Mus musculus
Title Organoid_OSCAR_DM_1
BioProject PRJCA014442
BioSample SAMC1052337
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644376 CRR644376_f1.fastq.gz
CRR644376_r2.fastq.gz 		5,314.45
4,659.04
CRR644377 CRR644377_f1.fastq.gz
CRR644377_r2.fastq.gz 		5,229.9
4,628.63
CRR644378 CRR644378_f1.fastq.gz
CRR644378_r2.fastq.gz 		6,930.19
6,171.73
CRR644379 CRR644379_f1.fastq.gz
CRR644379_r2.fastq.gz 		6,819.96
6,137.19
CRR644380 CRR644380_f1.fastq.gz
CRR644380_r2.fastq.gz 		6,351.07
5,601.29
CRR644381 CRR644381_f1.fastq.gz
CRR644381_r2.fastq.gz 		6,245.01
5,563.08
CRR644382 CRR644382_f1.fastq.gz
CRR644382_r2.fastq.gz 		6,593.29
5,791.47
CRR644383 CRR644383_f1.fastq.gz
CRR644383_r2.fastq.gz 		6,496.61
5,764.41
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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