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Experiment information
Accession CRX575972
Organism Mus musculus
Title Organoid_OSCAR_DM_2
BioProject PRJCA014442
BioSample SAMC1052338
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644384 CRR644384_f1.fastq.gz
CRR644384_r2.fastq.gz 		6,260.66
5,503.33
CRR644385 CRR644385_f1.fastq.gz
CRR644385_r2.fastq.gz 		6,166.74
5,474.11
CRR644386 CRR644386_f1.fastq.gz
CRR644386_r2.fastq.gz 		5,569.39
4,878.81
CRR644387 CRR644387_f1.fastq.gz
CRR644387_r2.fastq.gz 		5,483.4
4,850.55
CRR644388 CRR644388_f1.fastq.gz
CRR644388_r2.fastq.gz 		6,728.9
5,921.2
CRR644389 CRR644389_f1.fastq.gz
CRR644389_r2.fastq.gz 		6,632.52
5,893.74
CRR644390 CRR644390_f1.fastq.gz
CRR644390_r2.fastq.gz 		7,792.32
6,820.64
CRR644391 CRR644391_f1.fastq.gz
CRR644391_r2.fastq.gz 		7,675.84
6,783.64
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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