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Experiment information
Accession CRX575973
Organism Mus musculus
Title Organoid_OSCAR_DM_3
BioProject PRJCA014442
BioSample SAMC1052339
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644392 CRR644392_f1.fastq.gz
CRR644392_r2.fastq.gz 		10,180.88
8,974.21
CRR644393 CRR644393_f1.fastq.gz
CRR644393_r2.fastq.gz 		10,013.79
8,917.73
CRR644394 CRR644394_f1.fastq.gz
CRR644394_r2.fastq.gz 		12,047.79
10,694.55
CRR644395 CRR644395_f1.fastq.gz
CRR644395_r2.fastq.gz 		11,880.41
10,659.45
CRR644396 CRR644396_f1.fastq.gz
CRR644396_r2.fastq.gz 		12,629.69
11,194.48
CRR644397 CRR644397_f1.fastq.gz
CRR644397_r2.fastq.gz 		12,418.29
11,127.5
CRR644398 CRR644398_f1.fastq.gz
CRR644398_r2.fastq.gz 		13,763.66
12,274.72
CRR644399 CRR644399_f1.fastq.gz
CRR644399_r2.fastq.gz 		13,513.03
12,179.34
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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