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Experiment information
Accession CRX575975
Organism Mus musculus
Title Organoid_OSCAR_DM_5
BioProject PRJCA014442
BioSample SAMC1052341
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644408 CRR644408_f1.fastq.gz
CRR644408_r2.fastq.gz 		7,954.33
7,023.57
CRR644409 CRR644409_f1.fastq.gz
CRR644409_r2.fastq.gz 		7,815.37
6,972.61
CRR644410 CRR644410_f1.fastq.gz
CRR644410_r2.fastq.gz 		6,323.31
5,591.53
CRR644411 CRR644411_f1.fastq.gz
CRR644411_r2.fastq.gz 		6,217.61
5,556.52
CRR644412 CRR644412_f1.fastq.gz
CRR644412_r2.fastq.gz 		6,110.86
5,385.36
CRR644413 CRR644413_f1.fastq.gz
CRR644413_r2.fastq.gz 		6,014.57
5,354.92
CRR644414 CRR644414_f1.fastq.gz
CRR644414_r2.fastq.gz 		5,175.22
4,575.75
CRR644415 CRR644415_f1.fastq.gz
CRR644415_r2.fastq.gz 		5,092.32
4,548.75
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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