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Experiment information
Accession CRX575976
Organism Mus musculus
Title Organoid_OSCAR_DM_6
BioProject PRJCA014442
BioSample SAMC1052342
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644416 CRR644416_f1.fastq.gz
CRR644416_r2.fastq.gz 		6,990.53
6,187.74
CRR644417 CRR644417_f1.fastq.gz
CRR644417_r2.fastq.gz 		6,879.34
6,154.03
CRR644418 CRR644418_f1.fastq.gz
CRR644418_r2.fastq.gz 		6,860.64
6,044.31
CRR644419 CRR644419_f1.fastq.gz
CRR644419_r2.fastq.gz 		6,745.34
6,003.87
CRR644420 CRR644420_f1.fastq.gz
CRR644420_r2.fastq.gz 		7,951.76
7,028.08
CRR644421 CRR644421_f1.fastq.gz
CRR644421_r2.fastq.gz 		7,825.22
6,989.11
CRR644422 CRR644422_f1.fastq.gz
CRR644422_r2.fastq.gz 		6,772.07
5,988.9
CRR644423 CRR644423_f1.fastq.gz
CRR644423_r2.fastq.gz 		6,656.86
5,949.19
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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