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Experiment information
Accession CRX575978
Organism Mus musculus
Title Organoid_OSCAR_EM_2
BioProject PRJCA014442
BioSample SAMC1052344
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644436 CRR644436_f1.fastq.gz
CRR644436_r2.fastq.gz 		6,491.23
5,881.75
CRR644437 CRR644437_f1.fastq.gz
CRR644437_r2.fastq.gz 		6,368.72
5,838.74
CRR644438 CRR644438_f1.fastq.gz
CRR644438_r2.fastq.gz 		6,365.59
5,635.5
CRR644439 CRR644439_f1.fastq.gz
CRR644439_r2.fastq.gz 		6,256.63
5,597.82
CRR644440 CRR644440_f1.fastq.gz
CRR644440_r2.fastq.gz 		7,647.18
6,755
CRR644441 CRR644441_f1.fastq.gz
CRR644441_r2.fastq.gz 		7,517.39
6,710.69
CRR644442 CRR644442_f1.fastq.gz
CRR644442_r2.fastq.gz 		7,187.24
6,351.56
CRR644443 CRR644443_f1.fastq.gz
CRR644443_r2.fastq.gz 		7,078.47
6,322.78
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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