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Experiment information
Accession CRX575979
Organism Mus musculus
Title Organoid_OSCAR_EM_3
BioProject PRJCA014442
BioSample SAMC1052345
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
At the endpoint of differentiation, approximately 30,000 BECs from EM condition and 60,000 differentiated hepatocyte-like cells from DM condition were captured by the Chromium Controller using Chromium Next GEM Single Cell 3 kit v2 (10 Genomics) with 10,000 input cells for each lane. Libraries were built according to the manufacturer s instructions and sequenced on an Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-01-27
Run
Run accession Run data file information
File nameFile size (MB)
CRR644444 CRR644444_f1.fastq.gz
CRR644444_r2.fastq.gz 		5,507.79
4,869.46
CRR644445 CRR644445_f1.fastq.gz
CRR644445_r2.fastq.gz 		5,407.76
4,832.86
CRR644446 CRR644446_f1.fastq.gz
CRR644446_r2.fastq.gz 		6,224.99
5,600.21
CRR644447 CRR644447_f1.fastq.gz
CRR644447_r2.fastq.gz 		6,118.65
5,566.35
CRR644448 CRR644448_f1.fastq.gz
CRR644448_r2.fastq.gz 		6,179.38
5,443.1
CRR644449 CRR644449_f1.fastq.gz
CRR644449_r2.fastq.gz 		6,081.43
5,414.08
CRR644450 CRR644450_f1.fastq.gz
CRR644450_r2.fastq.gz 		6,549.21
5,804
CRR644451 CRR644451_f1.fastq.gz
CRR644451_r2.fastq.gz 		6,428.99
5,757.23
SubmitterJun Cao (caojundudu@qq.com)
OrganizationInstitute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College
Date submitted2023-01-20
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