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实验基本信息
实验编号 CRX765117
物种名称 Mus musculus
标题 GBM3
项目编号 PRJCA018602
样本编号 SAMC3004233
测序平台 Illumina NovaSeq 6000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
Similar to NGS library preparation, scRNA library and VDJ library preparation were also performed by DNA fragmentation, end repair, A-tailing, adaptor ligation and sample index PCR. The post ligation cleanup cDNA was amplified using the following program: 98 °C for 45s, followed by 15 cycles of 98 °C for 20 s, 67 °C for 30 s and 72 °C for 20s. 1 µl of sample (1:10 dilution) was added to an Agilent Bioanalyzer High Sensitivity chip(Agilent, 5067-4626) to determine the average fragment size. Library concentration was determined using the Qubit dsDNA HS Assay Kit(Thermo, Q32854) OTHER TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
发布日期2024-04-04
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR848810 CRR848810_f1.fastq.gz
CRR848810_r2.fastq.gz
6,151.4
5,631.26
CRR848811 CRR848811_f1.fastq.gz
CRR848811_r2.fastq.gz
6,800.44
6,234.44
CRR848812 CRR848812_f1.fastq.gz
CRR848812_r2.fastq.gz
7,989.24
7,374
CRR848813 CRR848813_f1.fastq.gz
CRR848813_r2.fastq.gz
6,630.2
6,117.49
提交者Nu Zhang (zhangnu2@mail.sysu.edu.cn)
所属单位Sun Yat-sen University
提交日期2023-08-16