logo
Experiment information
Accession CRX917137
Organism Vibrio parahaemolyticus
Title SHP-1269
BioProject PRJCA022673
BioSample SAMC3303206
Platform Illumina HiSeq X Ten
Library
Library name Construction protocol Strategy Source Selection Layout
All isolates were cultivated in ryptic soytone broth medium (HuanKai Microbial, China) overnight at 37 °C. After genomic DNA was extracted using the Bacteria Genomic DNA Extraction kit (Magen Biotech, China). DNA integrity and quantity were assessed on a Nanodrop UV-vis spectrophotometer (Thermo Fisher, USA) and 1% agarose gel electrophoresis visualized with ethidium bromide in a ChemiDoc XRS photodocumenter (BioRad, USA). Paired-end libraries were constructed using the TruSeq DNA Sample Prep Kit (Illumina, USA) according to the manufacturer’s instructions. The libraries were subjected to purification using AMPure XP Beads (Beckman Coulter, USA). For the sequencing phase, the Illumina X-10 platform was employed, generating 2 × 150 bp paired-end reads, consequently accumulating a total of 2 GB data per individual sample. WGS GENOMIC RANDOM PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2024-01-08
Run
Run accession Run data file information
File nameFile size (MB)
CRR1007489 CRR1007489_f1.fastq.gz
CRR1007489_r2.fastq.gz
323.07
358.75
SubmitterZilong Zhang (heilong82@163.com)
OrganizationShanghai International Travel Healthcare Center
Date submitted2024-01-08