logo
实验基本信息
实验编号 CRX1209775
物种名称 Bos taurus
外部数据库编号 Gene Expression Omnibus: GSM8216281
标题 fetal_rumen_chip_H3K4me3_1
项目编号 PRJCA030053
样本编号 SAMC4170910
测序平台 Illumina NovaSeq 6000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
For tissues, we collected fetal tissues from four healthy pregnant Holstein cows at a slaughterhouse. After the slaughter, we extracted fetal tissues to examine their normal development and measured the crown-rump length (CRL) to estimate gestational age. The gender was identified based on the position of the gonads within the abdominal cavity, anatomical structures, and relationships with adjacent organs (mesonephros and/or kidneys). Two male and two female fetuses were identified (13-16 cm CRL), nine different tissues were collected, including the forebrain, hindbrain, heart, liver, lungs, skeletal muscle (hind limb), kidneys, rumen, and testes. Cells were collected by tryple-select enzyme and the lyophilized cells were sent for sequencing. Transcriptome (RNA) sequencing was performed by Tianjin Nuohe Zhiyuan Biotechnology Co., LTD, Tianjin, China. Sequencing libraries were generated using NEBNext UltraTM RNA Library Prep Kit for Illumina (NEB, USA) following manufacturer’s recommendations and index codes were added to attribute sequences to each samp ChIP-Seq GENOMIC PCR PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
发布日期2024-10-04
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR1322566 CRR1322566_r1.fq.gz
CRR1322566_r2.fq.gz
1,948.2
2,045.9
提交者jing wang (nnlrl@mail.imu.edu.cn)
所属单位Inner Mongolia University
提交日期2024-10-02