Toggle navigation
Databases
Tools
Standards
Publications
About
HervD Atlas
H
uman
e
ndogenous
r
etro
v
irus
D
isease Atlas is a curated knowledgebase of HERV-Disease associations
Home
Browse
HERVs
Diseases
Publications
Search
Knowledge Graph
Download
Documentation
Home
Browse
Publication
HervD_0103
Publication information
PMID
31745090
Title
Transposable element expression in tumors is associated with immune infiltration and increased antigenicity
DOI
10.1038/s41467-019-13035-2
Journal
Nature Communications
Date
2019
HERV-Elements associated about this publication
Search:
HERV Element
Reproted Disease
Mapped Disease
Disease Category
Association at Omics Level
Variation
Log2FC
P value
P adj
Effected Gene
Gene Expression
Phenotype Change
Method
Sample Source
Population
Harlequin-int
Stomach Adenocarcinoma
Gastric Adenocarcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
Harlequin-int
Bladder Urothelial Carcinoma
Bladder Urothelial Carcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Stomach Adenocarcinoma
Gastric Adenocarcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Stomach Adenocarcinoma
Gastric Adenocarcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Bladder Urothelial Carcinoma
Bladder Urothelial Carcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Liver Hepatocellular Carcinoma
Hepatocellular Carcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Head and Neck Squamous Cell Carcinoma
Head and Neck Squamous Cell Carcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Colon Adenocarcinoma
Colon Adenocarcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Colon Adenocarcinoma
Colon Adenocarcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
HERV-H-int
Lung Squamous Cell Carcinoma
Lung Squamous Cell Carcinoma
Cancer
RNA Expression
Up
-
-
<0.05
-
-
-
RNA-seq
Tumor tissue
-
Showing 1 to 10 of 124 entries
Previous
1
2
3
4
5
…
13
Next
HERV-Terms associated about this publication
Search:
HERV Name
Reproted Disease
Mapped Disease
Disease Category
Association at Omics Level
Variation
Log2FC
P value
P adj
Related Gene
Method
Sample Source
Population
Data Link
No data available in table
Processing ...
Showing 0 to 0 of 0 entries
Previous
Next
HERV-Term-gene correlation
Search:
Gene Name
Ensembl ID
Gene Regulation
HERV Name
HERV Regulation
Correlation
P value
P adj
No data available in table
Showing 0 to 0 of 0 entries
Previous
Next
