IC4R Information Commons for Rice

IC4R-OSJ02G406300

Gene Summary

Gene Accession IC4R-OSJ02G406300
Symbol Roc5(t), Roc5, GL2-5, OsROC5
ID Mapping LOC_Os02g45250,Os02g0674800
Gene Description Homeobox And Start Domains Containing Protein
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 7049
Chromosome Chromosome 2
Location 27487865:27494914
Strand -
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0003700 Molecular Function transcription factor activity
GO:0009653 Biological Process anatomical structure morphogenesis
GO:0030154 Biological Process cell differentiation
GO:0007275 Biological Process multicellular organismal development
GO:0009605 Biological Process response to external stimulus
GO:0009628 Biological Process response to abiotic stimulus
GO:0009058 Biological Process biosynthetic process
GO:0006139 Biological Process nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0005634 Cellular Component nucleus
GO:0006355 Biological Process Regulation Of Transcription, Dna-Templated
GO:0043565 Molecular Function Sequence-Specific Dna Binding
GO:0008289 Molecular Function Lipid Binding
GO:0003677 Molecular Function Dna Binding
GO:0006351 Biological Process Transcription, Dna-Templated
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
25.705901 21.831121 74.006039 0.0 0.726125 0.691042554 17
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments