IC4R Information Commons for Rice

IC4R-OSJ03G189500

Gene Summary

Gene Accession IC4R-OSJ03G189500
Symbol OsPHR1
ID Mapping LOC_Os03g21240,Os03g0329900
Gene Description Myb-Like Dna-Binding Domain Containing Protein
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 5101
Chromosome Chromosome 3
Location 12126242:12131343
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0006355 Biological Process Regulation Of Transcription, Dna-Templated
GO:0016563 Molecular Function transcription activator activity
GO:0006351 Biological Process Transcription, Dna-Templated
GO:0003677 Molecular Function Dna Binding
GO:0005634 Cellular Component nucleus
GO:0005634 Cellular Component nucleus
GO:0006139 Biological Process nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0009058 Biological Process biosynthetic process
GO:0006950 Biological Process response to stress
GO:0007154 Biological Process cell communication
GO:0009991 Biological Process response to extracellular stimulus
GO:0008150 Biological Process Biological Process
GO:0007165 Biological Process signal transduction
GO:0003700 Molecular Function transcription factor activity
Plant Ontology
PO:1000518 Others seedling development stage
PO:0000003 Plant Anatomy whole plant
PO:0009005 Plant Anatomy root
PO:0009046 Plant Anatomy flower
PO:0009047 Plant Anatomy stem
PO:0025034 Plant Anatomy leaf
Environment Ontology
EO:1000167 Others inorganic phosphate deficiency treatment
EO:1000166 Others inorganic phosphate
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
31.313703 30.750066 63.650278 1.358319 0.521905 0.537919519 18
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments