IC4R Information Commons for Rice

IC4R-OSJ03G265500

Gene Summary

Gene Accession IC4R-OSJ03G265500
Symbol RCH10*, Cht13, Cht12, Rcht2
ID Mapping LOC_Os03g30470,Os03g0418000
Gene Description Chit4 - Chitinase Family Protein Precursor
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 1348
Chromosome Chromosome 3
Location 17390790:17392138
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0006040 Biological Process amino sugar metabolic process
GO:0050832 Biological Process Defense Response To Fungus
GO:0000272 Biological Process Polysaccharide Catabolic Process
GO:0016998 Biological Process Cell Wall Macromolecule Catabolic Process
GO:0008061 Molecular Function Chitin Binding
GO:0005975 Biological Process Carbohydrate Metabolic Process
GO:0006032 Biological Process Chitin Catabolic Process
GO:0004568 Molecular Function Chitinase Activity
GO:0016231 Molecular Function beta
GO:0008843 Molecular Function endochitinase activity
GO:0016787 Molecular Function hydrolase activity
GO:0005829 Cellular Component cytosol
GO:0016020 Cellular Component membrane
GO:0005773 Cellular Component vacuole
GO:0009719 Biological Process response to endogenous stimulus
GO:0007165 Biological Process signal transduction
GO:0008150 Biological Process Biological Process
GO:0008152 Biological Process metabolic process
GO:0009607 Biological Process response to biotic stimulus
GO:0006950 Biological Process response to stress
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
10.647432 2.781161 71.652653 0.0 1.704917 0.9014846 16
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments