IC4R-OSJ03G474100

Gene Summary

Gene Accession IC4R-OSJ03G474100
Symbol Hd6(t)*, OSCKA2, OsCKA2, CKA2, OsCKA2-1, CKA2-1, Hd6/CK2alpha, CK2alpha
ID Mapping LOC_Os03g55389,Os03g0762000
Gene Description Casein Kinase Ii Subunit Alpha-1
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 5649
Chromosome Chromosome 3
Location 31508811:31514460
Strand -
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0005515 Molecular Function protein binding
GO:0010229 Biological Process Inflorescence Development
GO:0009908 Biological Process Flower Development
GO:0004674 Molecular Function Protein Serine/Threonine Kinase Activity
GO:0016021 Cellular Component Integral Component Of Membrane
GO:0005737 Cellular Component Cytoplasm
GO:0004672 Molecular Function Protein Kinase Activity
GO:0005524 Molecular Function Atp Binding
GO:0006468 Biological Process Protein Phosphorylation
GO:0009648 Biological Process photoperiodism
GO:0006464 Biological Process protein modification process
GO:0009987 Biological Process cellular process
GO:0008152 Biological Process metabolic process
GO:0016301 Molecular Function kinase activity
Plant Ontology
PO:0009013 Plant Anatomy portion of meristem tissue
Environment Ontology
No related terms.
Trait Ontology
TO:0000229 Others photoperiod sensitivity
TO:0000469 Others days to maturity

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
23.137245 13.204206 96.668255 0.0 1.115798 0.805397422 17
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

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