IC4R Information Commons for Rice

IC4R-OSJ03G499400

Gene Summary

Gene Accession IC4R-OSJ03G499400
Symbol Hd16, EL1, CK1, Hd16/CKI, Hd16/EL1
ID Mapping LOC_Os03g57940,Os03g0793500
Gene Description Ck1_Caseinkinase_1A.4 - Ck1 Includes The Casein Kinase 1 Kinases
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 7396
Chromosome Chromosome 3
Location 32999502:33006898
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0005737 Cellular Component Cytoplasm
GO:0048586 Biological Process Regulation Of Long-Day Photoperiodism, Flowering
GO:0040008 Biological Process Regulation Of Growth
GO:0018105 Biological Process Peptidyl-Serine Phosphorylation
GO:0009908 Biological Process Flower Development
GO:0009740 Biological Process Gibberellic Acid Mediated Signaling Pathway
GO:0008360 Biological Process Regulation Of Cell Shape
GO:0005515 Molecular Function Protein Binding
GO:0004674 Molecular Function Protein Serine/Threonine Kinase Activity
GO:0016021 Cellular Component Integral Component Of Membrane
GO:0016301 Molecular Function kinase activity
GO:0005634 Cellular Component Nucleus
GO:0004672 Molecular Function Protein Kinase Activity
GO:0005524 Molecular Function Atp Binding
GO:0006468 Biological Process Protein Phosphorylation
GO:0005575 Cellular Component Cellular Component
GO:0006464 Biological Process protein modification process
GO:0009987 Biological Process cellular process
GO:0008152 Biological Process metabolic process
GO:0000166 Molecular Function nucleotide binding
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
45.885243 39.640976 129.364869 10.9814 0.637497 0.683262717 18
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments