IC4R Information Commons for Rice

IC4R-OSJ03G524000

Gene Summary

Gene Accession IC4R-OSJ03G524000
Symbol ZFP182
ID Mapping LOC_Os03g60560,Os03g0820300
Gene Description Zos3-21 - C2H2 Zinc Finger Protein
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 924
Chromosome Chromosome 3
Location 34424180:34425104
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0003700 Molecular Function transcription factor activity
GO:0005634 Cellular Component Nucleus
GO:0046872 Molecular Function Metal Ion Binding
GO:0006139 Biological Process nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0005488 Molecular Function binding
GO:0003676 Molecular Function nucleic acid binding
GO:0009409 Biological Process response to cold
GO:0009651 Biological Process response to salt stress
GO:0008150 Biological Process Biological Process
GO:0005622 Cellular Component intracellular
GO:0009058 Biological Process biosynthetic process
GO:0009737 Biological Process response to abscisic acid stimulus
Plant Ontology
PO:0009049 Plant Anatomy inflorescence
PO:0001053 Plant Structure Development Stage 3 leaf fully expanded
PO:1000315 Others second leaf from base
PO:0007115 Plant Structure Development Stage LP.04 four leaves visible
PO:0009047 Plant Anatomy stem
PO:0009025 Plant Anatomy vascular leaf
PO:0009005 Plant Anatomy root
PO:0008037 Plant Anatomy seedling
PO:0000006 Plant Anatomy plant protoplast
PO:0000005 Plant Anatomy cultured plant cell
PO:0000003 Plant Anatomy whole plant
PO:1000520 Others young inflorescence stage
PO:0007616 Plant Structure Development Stage 4 anthesis
Environment Ontology
EO:1000078 Others potassium chloride regimen (KCl)
EO:1000075 Others recovery treatment
EO:0007332 Others cold air temperature regimen
EO:0007198 Others water environment
EO:0007105 Others abscisic acid regimen
EO:0007080 Others jasmonic acid regimen
EO:0007048 Others sodium chloride regimen
Trait Ontology
TO:0000085 Others leaf rolling
TO:0000280 Others seedling vigor
TO:0000357 Others growth and development trait
TO:0000495 Others chlorophyll content
TO:1000034 Others superoxide dismutase (SOD) activity
TO:1000044 Others ascorbate peroxidase activity (APX)
TO:1000057 Others relative fresh weight

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
16.197729 6.538981 83.936436 1.128904 1.424675 0.854495854 18
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments