IC4R Information Commons for Rice

IC4R-OSJ04G496900

Gene Summary

Gene Accession IC4R-OSJ04G496900
Symbol OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, EG2, JAZ1/EG2
ID Mapping LOC_Os04g55920,Os04g0653000
Gene Description Zinc-Finger Protein
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 3771
Chromosome Chromosome 4
Location 33306461:33310232
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0005634 Cellular Component Nucleus
GO:2000022 Biological Process Regulation Of Jasmonic Acid Mediated Signaling Pathway
GO:1903507 Biological Process Negative Regulation Of Nucleic Acid-Templated Transcription
GO:0048449 Biological Process Floral Organ Formation
GO:0031347 Biological Process Regulation Of Defense Response
GO:0010582 Biological Process Floral Meristem Determinacy
GO:0009611 Biological Process Response To Wounding
GO:0006355 Biological Process Regulation Of Transcription, Dna-Templated
GO:0006351 Biological Process Transcription, Dna-Templated
GO:0003714 Molecular Function Transcription Corepressor Activity
GO:0005515 Molecular Function protein binding
GO:0008150 Biological Process Biological Process
Plant Ontology
PO:0008037 Plant Anatomy seedling
Environment Ontology
EO:0007048 Others sodium chloride regimen
EO:0007105 Others abscisic acid regimen
EO:0007332 Others cold air temperature regimen
EO:0007373 Others mechanical damage
EO:0007407 Others methyl jasmonate
EO:1000069 Others dessication/dehydration stress
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
173.507086 160.822426 460.120179 0.0 0.676404 0.659550917 17
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments