IC4R Information Commons for Rice

IC4R-OSJ04G505900

Gene Summary

Gene Accession IC4R-OSJ04G505900
Symbol OsMP, OsARF5, OsARF11
ID Mapping LOC_Os04g56850,Os04g0664400
Gene Description Auxin Response Factor
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 6389
Chromosome Chromosome 4
Location 33888004:33894393
Strand -
Additional Links MSU; RAP-DB;

Genome Browser

[View in new window]

Ontologies

Gene Ontology
GO:0005634 Cellular Component nucleus
GO:0048364 Biological Process Root Development
GO:0010305 Biological Process Leaf Vascular Tissue Pattern Formation
GO:0009942 Biological Process Longitudinal Axis Specification
GO:0009734 Biological Process Auxin-Activated Signaling Pathway
GO:0006351 Biological Process Transcription, Dna-Templated
GO:0044212 Molecular Function Transcription Regulatory Region Dna Binding
GO:0042802 Molecular Function Identical Protein Binding
GO:0016021 Cellular Component Integral Component Of Membrane
GO:0009725 Biological Process Response To Hormone
GO:0006355 Biological Process Regulation Of Transcription, Dna-Templated
GO:0048507 Biological Process meristem development
GO:0003677 Molecular Function DNA binding
GO:0016020 Cellular Component membrane
GO:0009791 Biological Process post
GO:0000003 Biological Process reproduction
GO:0009790 Biological Process embryonic development
GO:0009908 Biological Process flower development
GO:0006139 Biological Process nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0009058 Biological Process biosynthetic process
GO:0009719 Biological Process response to endogenous stimulus
GO:0007275 Biological Process multicellular organismal development
GO:0003700 Molecular Function transcription factor activity
GO:0005515 Molecular Function protein binding
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
14.026721 2.011544 76.666138 0.0 1.74009 0.865102769 13
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments